Protein–RNA interactions for Protein: Q9ERA6

Tfip11, Tuftelin-interacting protein 11, mousemouse

Known RBP Predictions only

Length 838 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tfip11Q9ERA6 Gm9905-201ENSMUST00000065740 1845 ntBASIC30.9■■■□□ 2.54
Tfip11Q9ERA6 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
Tfip11Q9ERA6 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
Tfip11Q9ERA6 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC30.9■■■□□ 2.54
Tfip11Q9ERA6 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC30.88■■■□□ 2.53
Tfip11Q9ERA6 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC30.88■■■□□ 2.53
Tfip11Q9ERA6 Gm16148-201ENSMUST00000119653 893 ntBASIC30.86■■■□□ 2.53
Tfip11Q9ERA6 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
Tfip11Q9ERA6 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC30.8■■■□□ 2.52
Tfip11Q9ERA6 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
Tfip11Q9ERA6 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
Tfip11Q9ERA6 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC30.8■■■□□ 2.52
Tfip11Q9ERA6 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC30.79■■■□□ 2.52
Tfip11Q9ERA6 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC30.78■■■□□ 2.52
Tfip11Q9ERA6 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC30.78■■■□□ 2.52
Tfip11Q9ERA6 Zfp131-205ENSMUST00000223812 663 ntBASIC30.77■■■□□ 2.52
Tfip11Q9ERA6 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
Tfip11Q9ERA6 Gm43445-201ENSMUST00000198564 2091 ntBASIC30.76■■■□□ 2.51
Tfip11Q9ERA6 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
Tfip11Q9ERA6 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC30.74■■■□□ 2.51
Tfip11Q9ERA6 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
Tfip11Q9ERA6 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
Tfip11Q9ERA6 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
Tfip11Q9ERA6 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC30.7■■■□□ 2.51
Tfip11Q9ERA6 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
Tfip11Q9ERA6 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
Tfip11Q9ERA6 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
Tfip11Q9ERA6 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
Tfip11Q9ERA6 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
Tfip11Q9ERA6 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
Tfip11Q9ERA6 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC30.62■■■□□ 2.49
Tfip11Q9ERA6 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC30.62■■■□□ 2.49
Tfip11Q9ERA6 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC30.62■■■□□ 2.49
Tfip11Q9ERA6 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
Tfip11Q9ERA6 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
Tfip11Q9ERA6 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC30.61■■■□□ 2.49
Tfip11Q9ERA6 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC30.59■■■□□ 2.49
Tfip11Q9ERA6 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
Tfip11Q9ERA6 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
Tfip11Q9ERA6 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC30.57■■■□□ 2.48
Tfip11Q9ERA6 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC30.55■■■□□ 2.48
Tfip11Q9ERA6 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC30.55■■■□□ 2.48
Tfip11Q9ERA6 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC30.55■■■□□ 2.48
Tfip11Q9ERA6 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
Tfip11Q9ERA6 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.48
Tfip11Q9ERA6 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC30.51■■■□□ 2.47
Tfip11Q9ERA6 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC30.51■■■□□ 2.47
Tfip11Q9ERA6 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC30.51■■■□□ 2.47
Tfip11Q9ERA6 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC30.5■■■□□ 2.47
Tfip11Q9ERA6 Amer2-203ENSMUST00000225247 2662 ntBASIC30.5■■■□□ 2.47
Tfip11Q9ERA6 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
Tfip11Q9ERA6 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
Tfip11Q9ERA6 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
Tfip11Q9ERA6 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC30.48■■■□□ 2.47
Tfip11Q9ERA6 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
Tfip11Q9ERA6 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC30.46■■■□□ 2.47
Tfip11Q9ERA6 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC30.45■■■□□ 2.47
Tfip11Q9ERA6 Gm6345-201ENSMUST00000180378 1691 ntBASIC30.45■■■□□ 2.46
Tfip11Q9ERA6 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC30.45■■■□□ 2.46
Tfip11Q9ERA6 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
Tfip11Q9ERA6 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
Tfip11Q9ERA6 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
Tfip11Q9ERA6 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
Tfip11Q9ERA6 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC30.43■■■□□ 2.46
Tfip11Q9ERA6 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC30.42■■■□□ 2.46
Tfip11Q9ERA6 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC30.42■■■□□ 2.46
Tfip11Q9ERA6 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC30.4■■■□□ 2.46
Tfip11Q9ERA6 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC30.4■■■□□ 2.46
Tfip11Q9ERA6 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC30.4■■■□□ 2.46
Tfip11Q9ERA6 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC30.4■■■□□ 2.46
Tfip11Q9ERA6 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
Tfip11Q9ERA6 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC30.39■■■□□ 2.46
Tfip11Q9ERA6 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
Tfip11Q9ERA6 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
Tfip11Q9ERA6 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC30.37■■■□□ 2.45
Tfip11Q9ERA6 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC30.36■■■□□ 2.45
Tfip11Q9ERA6 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
Tfip11Q9ERA6 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
Tfip11Q9ERA6 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
Tfip11Q9ERA6 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
Tfip11Q9ERA6 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
Tfip11Q9ERA6 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
Tfip11Q9ERA6 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC30.31■■■□□ 2.44
Tfip11Q9ERA6 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
Tfip11Q9ERA6 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
Tfip11Q9ERA6 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
Tfip11Q9ERA6 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC30.3■■■□□ 2.44
Tfip11Q9ERA6 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
Tfip11Q9ERA6 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC30.3■■■□□ 2.44
Tfip11Q9ERA6 Gm30346-201ENSMUST00000218641 1699 ntBASIC30.3■■■□□ 2.44
Tfip11Q9ERA6 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC30.29■■■□□ 2.44
Tfip11Q9ERA6 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
Tfip11Q9ERA6 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
Tfip11Q9ERA6 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC30.27■■■□□ 2.44
Tfip11Q9ERA6 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC30.27■■■□□ 2.44
Tfip11Q9ERA6 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC30.27■■■□□ 2.44
Tfip11Q9ERA6 Tdp2-203ENSMUST00000223804 1136 ntBASIC30.27■■■□□ 2.44
Tfip11Q9ERA6 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC30.26■■■□□ 2.43
Tfip11Q9ERA6 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
Tfip11Q9ERA6 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms