Protein–RNA interactions for Protein: Q9CYZ8

Ssbp2, Single-stranded DNA-binding protein 2, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssbp2Q9CYZ8 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ssbp2Q9CYZ8 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Ssbp2Q9CYZ8 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC20.23■□□□□ 0.83
Ssbp2Q9CYZ8 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ssbp2Q9CYZ8 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Ssbp2Q9CYZ8 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Ssbp2Q9CYZ8 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Ssbp2Q9CYZ8 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Ssbp2Q9CYZ8 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ssbp2Q9CYZ8 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Ssbp2Q9CYZ8 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ssbp2Q9CYZ8 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
Ssbp2Q9CYZ8 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC20.18■□□□□ 0.82
Ssbp2Q9CYZ8 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC20.17■□□□□ 0.82
Ssbp2Q9CYZ8 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ssbp2Q9CYZ8 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Ssbp2Q9CYZ8 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ssbp2Q9CYZ8 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Ssbp2Q9CYZ8 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Ssbp2Q9CYZ8 Gm9905-201ENSMUST00000065740 1845 ntBASIC20.16■□□□□ 0.82
Ssbp2Q9CYZ8 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Ssbp2Q9CYZ8 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ssbp2Q9CYZ8 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ssbp2Q9CYZ8 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ssbp2Q9CYZ8 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Ssbp2Q9CYZ8 Zxda-201ENSMUST00000117281 2621 ntBASIC20.15■□□□□ 0.82
Ssbp2Q9CYZ8 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ssbp2Q9CYZ8 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ssbp2Q9CYZ8 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Ssbp2Q9CYZ8 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ssbp2Q9CYZ8 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Ssbp2Q9CYZ8 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC20.1■□□□□ 0.81
Ssbp2Q9CYZ8 Gm30346-201ENSMUST00000218641 1699 ntBASIC20.1■□□□□ 0.81
Ssbp2Q9CYZ8 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ssbp2Q9CYZ8 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
Ssbp2Q9CYZ8 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Ssbp2Q9CYZ8 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Ssbp2Q9CYZ8 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Ssbp2Q9CYZ8 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ssbp2Q9CYZ8 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ssbp2Q9CYZ8 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ssbp2Q9CYZ8 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC20.06■□□□□ 0.8
Ssbp2Q9CYZ8 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC20.05■□□□□ 0.8
Ssbp2Q9CYZ8 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Ssbp2Q9CYZ8 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Ssbp2Q9CYZ8 Gm43445-201ENSMUST00000198564 2091 ntBASIC20.04■□□□□ 0.8
Ssbp2Q9CYZ8 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Ssbp2Q9CYZ8 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Ssbp2Q9CYZ8 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ssbp2Q9CYZ8 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ssbp2Q9CYZ8 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Ssbp2Q9CYZ8 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ssbp2Q9CYZ8 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Ssbp2Q9CYZ8 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ssbp2Q9CYZ8 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Ssbp2Q9CYZ8 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC20■□□□□ 0.79
Ssbp2Q9CYZ8 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ssbp2Q9CYZ8 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Ssbp2Q9CYZ8 Gm16148-201ENSMUST00000119653 893 ntBASIC19.99■□□□□ 0.79
Ssbp2Q9CYZ8 Gm6345-201ENSMUST00000180378 1691 ntBASIC19.98■□□□□ 0.79
Ssbp2Q9CYZ8 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ssbp2Q9CYZ8 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC19.98■□□□□ 0.79
Ssbp2Q9CYZ8 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Ssbp2Q9CYZ8 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ssbp2Q9CYZ8 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ssbp2Q9CYZ8 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ssbp2Q9CYZ8 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Ssbp2Q9CYZ8 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ssbp2Q9CYZ8 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Ssbp2Q9CYZ8 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ssbp2Q9CYZ8 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ssbp2Q9CYZ8 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Ssbp2Q9CYZ8 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Ssbp2Q9CYZ8 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Ssbp2Q9CYZ8 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Ssbp2Q9CYZ8 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ssbp2Q9CYZ8 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Ssbp2Q9CYZ8 Amer2-203ENSMUST00000225247 2662 ntBASIC19.91■□□□□ 0.78
Ssbp2Q9CYZ8 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Ssbp2Q9CYZ8 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Ssbp2Q9CYZ8 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ssbp2Q9CYZ8 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Ssbp2Q9CYZ8 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ssbp2Q9CYZ8 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Ssbp2Q9CYZ8 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Ssbp2Q9CYZ8 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Ssbp2Q9CYZ8 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC19.86■□□□□ 0.77
Ssbp2Q9CYZ8 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Ssbp2Q9CYZ8 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ssbp2Q9CYZ8 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ssbp2Q9CYZ8 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ssbp2Q9CYZ8 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Ssbp2Q9CYZ8 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Ssbp2Q9CYZ8 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Ssbp2Q9CYZ8 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ssbp2Q9CYZ8 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC19.82■□□□□ 0.76
Ssbp2Q9CYZ8 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ssbp2Q9CYZ8 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ssbp2Q9CYZ8 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC19.81■□□□□ 0.76
Ssbp2Q9CYZ8 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms