Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC23,1■■□□□ 1,29
Trim13Q9CYB0 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC23,08■■□□□ 1,29
Trim13Q9CYB0 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC23,06■■□□□ 1,28
Trim13Q9CYB0 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC23,06■■□□□ 1,28
Trim13Q9CYB0 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC23,06■■□□□ 1,28
Trim13Q9CYB0 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC23,05■■□□□ 1,28
Trim13Q9CYB0 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC23,05■■□□□ 1,28
Trim13Q9CYB0 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC23,03■■□□□ 1,28
Trim13Q9CYB0 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC23,01■■□□□ 1,27
Trim13Q9CYB0 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1,27
Trim13Q9CYB0 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC22,99■■□□□ 1,27
Trim13Q9CYB0 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC22,99■■□□□ 1,27
Trim13Q9CYB0 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC22,98■■□□□ 1,27
Trim13Q9CYB0 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC22,97■■□□□ 1,27
Trim13Q9CYB0 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC22,97■■□□□ 1,27
Trim13Q9CYB0 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC22,97■■□□□ 1,27
Trim13Q9CYB0 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC22,96■■□□□ 1,27
Trim13Q9CYB0 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC22,96■■□□□ 1,27
Trim13Q9CYB0 Gm6345-201ENSMUST00000180378 1691 ntBASIC22,96■■□□□ 1,27
Trim13Q9CYB0 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC22,95■■□□□ 1,26
Trim13Q9CYB0 Amer2-203ENSMUST00000225247 2662 ntBASIC22,95■■□□□ 1,26
Trim13Q9CYB0 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC22,94■■□□□ 1,26
Trim13Q9CYB0 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC22,94■■□□□ 1,26
Trim13Q9CYB0 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC22,93■■□□□ 1,26
Trim13Q9CYB0 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC22,93■■□□□ 1,26
Trim13Q9CYB0 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC22,93■■□□□ 1,26
Trim13Q9CYB0 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC22,92■■□□□ 1,26
Trim13Q9CYB0 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC22,92■■□□□ 1,26
Trim13Q9CYB0 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC22,91■■□□□ 1,26
Trim13Q9CYB0 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC22,9■■□□□ 1,26
Trim13Q9CYB0 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC22,89■■□□□ 1,26
Trim13Q9CYB0 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC22,89■■□□□ 1,25
Trim13Q9CYB0 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC22,89■■□□□ 1,25
Trim13Q9CYB0 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC22,89■■□□□ 1,25
Trim13Q9CYB0 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC22,87■■□□□ 1,25
Trim13Q9CYB0 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC22,86■■□□□ 1,25
Trim13Q9CYB0 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC22,86■■□□□ 1,25
Trim13Q9CYB0 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC22,86■■□□□ 1,25
Trim13Q9CYB0 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC22,85■■□□□ 1,25
Trim13Q9CYB0 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC22,84■■□□□ 1,25
Trim13Q9CYB0 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC22,84■■□□□ 1,25
Trim13Q9CYB0 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC22,84■■□□□ 1,25
Trim13Q9CYB0 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC22,83■■□□□ 1,25
Trim13Q9CYB0 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC22,83■■□□□ 1,25
Trim13Q9CYB0 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC22,83■■□□□ 1,25
Trim13Q9CYB0 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC22,83■■□□□ 1,24
Trim13Q9CYB0 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC22,82■■□□□ 1,24
Trim13Q9CYB0 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC22,82■■□□□ 1,24
Trim13Q9CYB0 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC22,82■■□□□ 1,24
Trim13Q9CYB0 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC22,81■■□□□ 1,24
Trim13Q9CYB0 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC22,81■■□□□ 1,24
Trim13Q9CYB0 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC22,81■■□□□ 1,24
Trim13Q9CYB0 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC22,81■■□□□ 1,24
Trim13Q9CYB0 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC22,79■■□□□ 1,24
Trim13Q9CYB0 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC22,79■■□□□ 1,24
Trim13Q9CYB0 AC166822.3-201ENSMUST00000227394 661 ntBASIC22,79■■□□□ 1,24
Trim13Q9CYB0 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC22,79■■□□□ 1,24
Trim13Q9CYB0 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC22,78■■□□□ 1,24
Trim13Q9CYB0 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC22,78■■□□□ 1,24
Trim13Q9CYB0 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC22,78■■□□□ 1,24
Trim13Q9CYB0 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC22,78■■□□□ 1,24
Trim13Q9CYB0 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC22,77■■□□□ 1,24
Trim13Q9CYB0 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC22,77■■□□□ 1,24
Trim13Q9CYB0 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC22,77■■□□□ 1,24
Trim13Q9CYB0 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC22,76■■□□□ 1,23
Trim13Q9CYB0 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC22,76■■□□□ 1,23
Trim13Q9CYB0 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC22,75■■□□□ 1,23
Trim13Q9CYB0 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC22,74■■□□□ 1,23
Trim13Q9CYB0 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC22,74■■□□□ 1,23
Trim13Q9CYB0 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC22,74■■□□□ 1,23
Trim13Q9CYB0 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC22,73■■□□□ 1,23
Trim13Q9CYB0 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC22,73■■□□□ 1,23
Trim13Q9CYB0 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC22,73■■□□□ 1,23
Trim13Q9CYB0 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC22,73■■□□□ 1,23
Trim13Q9CYB0 Fezf2-202ENSMUST00000224023 1917 ntBASIC22,72■■□□□ 1,23
Trim13Q9CYB0 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC22,72■■□□□ 1,23
Trim13Q9CYB0 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC22,72■■□□□ 1,23
Trim13Q9CYB0 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC22,71■■□□□ 1,23
Trim13Q9CYB0 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC22,71■■□□□ 1,23
Trim13Q9CYB0 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC22,71■■□□□ 1,23
Trim13Q9CYB0 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC22,71■■□□□ 1,23
Trim13Q9CYB0 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC22,7■■□□□ 1,23
Trim13Q9CYB0 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC22,7■■□□□ 1,22
Trim13Q9CYB0 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC22,7■■□□□ 1,22
Trim13Q9CYB0 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC22,69■■□□□ 1,22
Trim13Q9CYB0 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC22,69■■□□□ 1,22
Trim13Q9CYB0 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC22,67■■□□□ 1,22
Trim13Q9CYB0 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC22,67■■□□□ 1,22
Trim13Q9CYB0 Gm17082-201ENSMUST00000166043 1091 ntBASIC22,67■■□□□ 1,22
Trim13Q9CYB0 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC22,67■■□□□ 1,22
Trim13Q9CYB0 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC22,66■■□□□ 1,22
Trim13Q9CYB0 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC22,66■■□□□ 1,22
Trim13Q9CYB0 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC22,66■■□□□ 1,22
Trim13Q9CYB0 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC22,66■■□□□ 1,22
Trim13Q9CYB0 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC22,65■■□□□ 1,22
Trim13Q9CYB0 Gm26115-201ENSMUST00000175605 87 ntBASIC22,65■■□□□ 1,22
Trim13Q9CYB0 Gm27322-201ENSMUST00000184007 104 ntBASIC22,65■■□□□ 1,22
Trim13Q9CYB0 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC22,65■■□□□ 1,22
Trim13Q9CYB0 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC22,65■■□□□ 1,22
Trim13Q9CYB0 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC22,64■■□□□ 1,22
Retrieved 100 of 76,532 protein–RNA pairs in 39,1 ms