Protein–RNA interactions for Protein: Q9CQI6

Cotl1, Coactosin-like protein, mousemouse

Predictions only

Length 142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cotl1Q9CQI6 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Cotl1Q9CQI6 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cotl1Q9CQI6 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Cotl1Q9CQI6 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Cotl1Q9CQI6 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cotl1Q9CQI6 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cotl1Q9CQI6 Gm9905-201ENSMUST00000065740 1845 ntBASIC19.37■□□□□ 0.69
Cotl1Q9CQI6 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC19.36■□□□□ 0.69
Cotl1Q9CQI6 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Cotl1Q9CQI6 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cotl1Q9CQI6 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Cotl1Q9CQI6 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Cotl1Q9CQI6 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cotl1Q9CQI6 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Cotl1Q9CQI6 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cotl1Q9CQI6 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Cotl1Q9CQI6 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cotl1Q9CQI6 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cotl1Q9CQI6 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cotl1Q9CQI6 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Cotl1Q9CQI6 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cotl1Q9CQI6 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cotl1Q9CQI6 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Cotl1Q9CQI6 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cotl1Q9CQI6 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Cotl1Q9CQI6 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Cotl1Q9CQI6 Gm2415-204ENSMUST00000190235 2004 ntBASIC19.29■□□□□ 0.68
Cotl1Q9CQI6 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Cotl1Q9CQI6 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Cotl1Q9CQI6 AC122428.3-201ENSMUST00000215551 2290 ntBASIC19.28■□□□□ 0.68
Cotl1Q9CQI6 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cotl1Q9CQI6 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cotl1Q9CQI6 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cotl1Q9CQI6 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Cotl1Q9CQI6 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Cotl1Q9CQI6 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Cotl1Q9CQI6 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cotl1Q9CQI6 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cotl1Q9CQI6 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cotl1Q9CQI6 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cotl1Q9CQI6 Gm25262-201ENSMUST00000174934 133 ntBASIC19.2■□□□□ 0.66
Cotl1Q9CQI6 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cotl1Q9CQI6 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Cotl1Q9CQI6 Gm6658-202ENSMUST00000209493 1885 ntBASIC19.19■□□□□ 0.66
Cotl1Q9CQI6 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Cotl1Q9CQI6 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cotl1Q9CQI6 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cotl1Q9CQI6 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Cotl1Q9CQI6 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC19.16■□□□□ 0.66
Cotl1Q9CQI6 AL845457.1-201ENSMUST00000197244 68 ntBASIC19.15■□□□□ 0.66
Cotl1Q9CQI6 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Cotl1Q9CQI6 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cotl1Q9CQI6 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Cotl1Q9CQI6 Gm6206-201ENSMUST00000133472 2199 ntBASIC19.13■□□□□ 0.65
Cotl1Q9CQI6 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cotl1Q9CQI6 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cotl1Q9CQI6 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cotl1Q9CQI6 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cotl1Q9CQI6 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cotl1Q9CQI6 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cotl1Q9CQI6 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cotl1Q9CQI6 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cotl1Q9CQI6 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cotl1Q9CQI6 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cotl1Q9CQI6 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cotl1Q9CQI6 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Cotl1Q9CQI6 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Cotl1Q9CQI6 Mipep-204ENSMUST00000225043 1548 ntBASIC19.07■□□□□ 0.64
Cotl1Q9CQI6 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Cotl1Q9CQI6 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cotl1Q9CQI6 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cotl1Q9CQI6 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cotl1Q9CQI6 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cotl1Q9CQI6 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cotl1Q9CQI6 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC19.06■□□□□ 0.64
Cotl1Q9CQI6 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cotl1Q9CQI6 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cotl1Q9CQI6 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cotl1Q9CQI6 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Cotl1Q9CQI6 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cotl1Q9CQI6 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cotl1Q9CQI6 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cotl1Q9CQI6 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cotl1Q9CQI6 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Cotl1Q9CQI6 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC19.03■□□□□ 0.64
Cotl1Q9CQI6 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cotl1Q9CQI6 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Cotl1Q9CQI6 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Cotl1Q9CQI6 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Cotl1Q9CQI6 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cotl1Q9CQI6 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cotl1Q9CQI6 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cotl1Q9CQI6 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Cotl1Q9CQI6 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cotl1Q9CQI6 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cotl1Q9CQI6 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Cotl1Q9CQI6 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC18.99■□□□□ 0.63
Cotl1Q9CQI6 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC18.99■□□□□ 0.63
Cotl1Q9CQI6 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Cotl1Q9CQI6 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 15.3 ms