Protein–RNA interactions for Protein: Q9CQ70

H2afb1, Histone H2A-Bbd type 1, mousemouse

Predictions only

Length 111 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1Q9CQ70 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
H2afb1Q9CQ70 Gm6345-201ENSMUST00000180378 1691 ntBASIC20.71■□□□□ 0.91
H2afb1Q9CQ70 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
H2afb1Q9CQ70 Gm6206-201ENSMUST00000133472 2199 ntBASIC20.7■□□□□ 0.9
H2afb1Q9CQ70 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC20.69■□□□□ 0.9
H2afb1Q9CQ70 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
H2afb1Q9CQ70 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
H2afb1Q9CQ70 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
H2afb1Q9CQ70 Peli2-204ENSMUST00000226513 1320 ntBASIC20.68■□□□□ 0.9
H2afb1Q9CQ70 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
H2afb1Q9CQ70 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
H2afb1Q9CQ70 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
H2afb1Q9CQ70 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
H2afb1Q9CQ70 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
H2afb1Q9CQ70 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
H2afb1Q9CQ70 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
H2afb1Q9CQ70 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
H2afb1Q9CQ70 Gm43445-201ENSMUST00000198564 2091 ntBASIC20.64■□□□□ 0.89
H2afb1Q9CQ70 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
H2afb1Q9CQ70 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
H2afb1Q9CQ70 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
H2afb1Q9CQ70 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
H2afb1Q9CQ70 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
H2afb1Q9CQ70 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
H2afb1Q9CQ70 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
H2afb1Q9CQ70 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
H2afb1Q9CQ70 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
H2afb1Q9CQ70 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
H2afb1Q9CQ70 Gm30346-201ENSMUST00000218641 1699 ntBASIC20.58■□□□□ 0.89
H2afb1Q9CQ70 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
H2afb1Q9CQ70 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
H2afb1Q9CQ70 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
H2afb1Q9CQ70 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
H2afb1Q9CQ70 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
H2afb1Q9CQ70 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC20.54■□□□□ 0.88
H2afb1Q9CQ70 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
H2afb1Q9CQ70 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC20.53■□□□□ 0.88
H2afb1Q9CQ70 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
H2afb1Q9CQ70 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
H2afb1Q9CQ70 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
H2afb1Q9CQ70 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
H2afb1Q9CQ70 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
H2afb1Q9CQ70 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
H2afb1Q9CQ70 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
H2afb1Q9CQ70 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
H2afb1Q9CQ70 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
H2afb1Q9CQ70 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC20.49■□□□□ 0.87
H2afb1Q9CQ70 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
H2afb1Q9CQ70 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
H2afb1Q9CQ70 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
H2afb1Q9CQ70 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
H2afb1Q9CQ70 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
H2afb1Q9CQ70 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
H2afb1Q9CQ70 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
H2afb1Q9CQ70 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
H2afb1Q9CQ70 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
H2afb1Q9CQ70 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
H2afb1Q9CQ70 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
H2afb1Q9CQ70 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
H2afb1Q9CQ70 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
H2afb1Q9CQ70 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
H2afb1Q9CQ70 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
H2afb1Q9CQ70 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
H2afb1Q9CQ70 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
H2afb1Q9CQ70 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC20.43■□□□□ 0.86
H2afb1Q9CQ70 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
H2afb1Q9CQ70 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
H2afb1Q9CQ70 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
H2afb1Q9CQ70 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
H2afb1Q9CQ70 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
H2afb1Q9CQ70 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC20.4■□□□□ 0.86
H2afb1Q9CQ70 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC20.39■□□□□ 0.86
H2afb1Q9CQ70 Gm24804-201ENSMUST00000174982 85 ntBASIC20.39■□□□□ 0.85
H2afb1Q9CQ70 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC20.37■□□□□ 0.85
H2afb1Q9CQ70 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
H2afb1Q9CQ70 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
H2afb1Q9CQ70 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
H2afb1Q9CQ70 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC20.36■□□□□ 0.85
H2afb1Q9CQ70 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC20.36■□□□□ 0.85
H2afb1Q9CQ70 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
H2afb1Q9CQ70 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC20.35■□□□□ 0.85
H2afb1Q9CQ70 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
H2afb1Q9CQ70 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC20.34■□□□□ 0.85
H2afb1Q9CQ70 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
H2afb1Q9CQ70 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
H2afb1Q9CQ70 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
H2afb1Q9CQ70 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
H2afb1Q9CQ70 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
H2afb1Q9CQ70 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
H2afb1Q9CQ70 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC20.29■□□□□ 0.84
H2afb1Q9CQ70 Amer2-203ENSMUST00000225247 2662 ntBASIC20.29■□□□□ 0.84
H2afb1Q9CQ70 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
H2afb1Q9CQ70 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
H2afb1Q9CQ70 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
H2afb1Q9CQ70 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
H2afb1Q9CQ70 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
H2afb1Q9CQ70 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
H2afb1Q9CQ70 Gm16148-201ENSMUST00000119653 893 ntBASIC20.26■□□□□ 0.83
H2afb1Q9CQ70 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC20.25■□□□□ 0.83
H2afb1Q9CQ70 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms