Protein–RNA interactions for Protein: Q9CQ70

H2afb1, Histone H2A-Bbd type 1, mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1Q9CQ70 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
H2afb1Q9CQ70 Gm6345-201ENSMUST00000180378 1691 ntBASIC20.71■□□□□ 0.91
H2afb1Q9CQ70 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
H2afb1Q9CQ70 Gm6206-201ENSMUST00000133472 2199 ntBASIC20.7■□□□□ 0.9
H2afb1Q9CQ70 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC20.69■□□□□ 0.9
H2afb1Q9CQ70 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
H2afb1Q9CQ70 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
H2afb1Q9CQ70 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
H2afb1Q9CQ70 Peli2-204ENSMUST00000226513 1320 ntBASIC20.68■□□□□ 0.9
H2afb1Q9CQ70 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
H2afb1Q9CQ70 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
H2afb1Q9CQ70 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
H2afb1Q9CQ70 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
H2afb1Q9CQ70 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
H2afb1Q9CQ70 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
H2afb1Q9CQ70 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
H2afb1Q9CQ70 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
H2afb1Q9CQ70 Gm43445-201ENSMUST00000198564 2091 ntBASIC20.64■□□□□ 0.89
H2afb1Q9CQ70 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
H2afb1Q9CQ70 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
H2afb1Q9CQ70 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
H2afb1Q9CQ70 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
H2afb1Q9CQ70 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
H2afb1Q9CQ70 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
H2afb1Q9CQ70 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
H2afb1Q9CQ70 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
H2afb1Q9CQ70 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
H2afb1Q9CQ70 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
H2afb1Q9CQ70 Gm30346-201ENSMUST00000218641 1699 ntBASIC20.58■□□□□ 0.89
H2afb1Q9CQ70 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
H2afb1Q9CQ70 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
H2afb1Q9CQ70 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
H2afb1Q9CQ70 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
H2afb1Q9CQ70 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
H2afb1Q9CQ70 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC20.54■□□□□ 0.88
H2afb1Q9CQ70 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
H2afb1Q9CQ70 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC20.53■□□□□ 0.88
H2afb1Q9CQ70 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
H2afb1Q9CQ70 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
H2afb1Q9CQ70 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
H2afb1Q9CQ70 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
H2afb1Q9CQ70 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
H2afb1Q9CQ70 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
H2afb1Q9CQ70 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
H2afb1Q9CQ70 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
H2afb1Q9CQ70 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
H2afb1Q9CQ70 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC20.49■□□□□ 0.87
H2afb1Q9CQ70 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
H2afb1Q9CQ70 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
H2afb1Q9CQ70 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
H2afb1Q9CQ70 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
H2afb1Q9CQ70 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
H2afb1Q9CQ70 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
H2afb1Q9CQ70 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
H2afb1Q9CQ70 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
H2afb1Q9CQ70 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
H2afb1Q9CQ70 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
H2afb1Q9CQ70 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
H2afb1Q9CQ70 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
H2afb1Q9CQ70 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
H2afb1Q9CQ70 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
H2afb1Q9CQ70 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
H2afb1Q9CQ70 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
H2afb1Q9CQ70 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
H2afb1Q9CQ70 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC20.43■□□□□ 0.86
H2afb1Q9CQ70 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
H2afb1Q9CQ70 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
H2afb1Q9CQ70 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
H2afb1Q9CQ70 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
H2afb1Q9CQ70 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
H2afb1Q9CQ70 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC20.4■□□□□ 0.86
H2afb1Q9CQ70 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC20.39■□□□□ 0.86
H2afb1Q9CQ70 Gm24804-201ENSMUST00000174982 85 ntBASIC20.39■□□□□ 0.85
H2afb1Q9CQ70 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC20.37■□□□□ 0.85
H2afb1Q9CQ70 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
H2afb1Q9CQ70 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
H2afb1Q9CQ70 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
H2afb1Q9CQ70 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC20.36■□□□□ 0.85
H2afb1Q9CQ70 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC20.36■□□□□ 0.85
H2afb1Q9CQ70 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
H2afb1Q9CQ70 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC20.35■□□□□ 0.85
H2afb1Q9CQ70 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
H2afb1Q9CQ70 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC20.34■□□□□ 0.85
H2afb1Q9CQ70 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
H2afb1Q9CQ70 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
H2afb1Q9CQ70 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
H2afb1Q9CQ70 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
H2afb1Q9CQ70 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
H2afb1Q9CQ70 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
H2afb1Q9CQ70 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC20.29■□□□□ 0.84
H2afb1Q9CQ70 Amer2-203ENSMUST00000225247 2662 ntBASIC20.29■□□□□ 0.84
H2afb1Q9CQ70 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
H2afb1Q9CQ70 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
H2afb1Q9CQ70 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
H2afb1Q9CQ70 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
H2afb1Q9CQ70 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
H2afb1Q9CQ70 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
H2afb1Q9CQ70 Gm16148-201ENSMUST00000119653 893 ntBASIC20.26■□□□□ 0.83
H2afb1Q9CQ70 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC20.25■□□□□ 0.83
H2afb1Q9CQ70 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms