Protein–RNA interactions for Protein: Q99P72

Rtn4, Reticulon-4, mousemouse

Known RBP Predictions only

Length 1,162 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4Q99P72 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC31.86■■■□□ 2.69
Rtn4Q99P72 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
Rtn4Q99P72 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC31.86■■■□□ 2.69
Rtn4Q99P72 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
Rtn4Q99P72 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC31.85■■■□□ 2.69
Rtn4Q99P72 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC31.83■■■□□ 2.69
Rtn4Q99P72 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
Rtn4Q99P72 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
Rtn4Q99P72 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC31.81■■■□□ 2.68
Rtn4Q99P72 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC31.8■■■□□ 2.68
Rtn4Q99P72 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
Rtn4Q99P72 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
Rtn4Q99P72 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
Rtn4Q99P72 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC31.78■■■□□ 2.68
Rtn4Q99P72 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC31.77■■■□□ 2.68
Rtn4Q99P72 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC31.76■■■□□ 2.68
Rtn4Q99P72 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC31.75■■■□□ 2.67
Rtn4Q99P72 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC31.71■■■□□ 2.67
Rtn4Q99P72 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
Rtn4Q99P72 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
Rtn4Q99P72 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
Rtn4Q99P72 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
Rtn4Q99P72 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC31.69■■■□□ 2.66
Rtn4Q99P72 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC31.68■■■□□ 2.66
Rtn4Q99P72 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
Rtn4Q99P72 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC31.66■■■□□ 2.66
Rtn4Q99P72 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC31.66■■■□□ 2.66
Rtn4Q99P72 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC31.66■■■□□ 2.66
Rtn4Q99P72 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC31.64■■■□□ 2.66
Rtn4Q99P72 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
Rtn4Q99P72 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC31.63■■■□□ 2.65
Rtn4Q99P72 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC31.62■■■□□ 2.65
Rtn4Q99P72 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC31.61■■■□□ 2.65
Rtn4Q99P72 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC31.61■■■□□ 2.65
Rtn4Q99P72 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC31.59■■■□□ 2.65
Rtn4Q99P72 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC31.59■■■□□ 2.65
Rtn4Q99P72 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
Rtn4Q99P72 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC31.58■■■□□ 2.65
Rtn4Q99P72 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC31.58■■■□□ 2.65
Rtn4Q99P72 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
Rtn4Q99P72 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
Rtn4Q99P72 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC31.57■■■□□ 2.64
Rtn4Q99P72 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
Rtn4Q99P72 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
Rtn4Q99P72 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC31.54■■■□□ 2.64
Rtn4Q99P72 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC31.53■■■□□ 2.64
Rtn4Q99P72 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
Rtn4Q99P72 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC31.53■■■□□ 2.64
Rtn4Q99P72 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
Rtn4Q99P72 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
Rtn4Q99P72 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC31.52■■■□□ 2.64
Rtn4Q99P72 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
Rtn4Q99P72 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC31.5■■■□□ 2.63
Rtn4Q99P72 Gm2415-204ENSMUST00000190235 2004 ntBASIC31.49■■■□□ 2.63
Rtn4Q99P72 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC31.49■■■□□ 2.63
Rtn4Q99P72 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC31.48■■■□□ 2.63
Rtn4Q99P72 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC31.48■■■□□ 2.63
Rtn4Q99P72 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
Rtn4Q99P72 Gm24970-201ENSMUST00000175582 82 ntBASIC31.47■■■□□ 2.63
Rtn4Q99P72 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC31.47■■■□□ 2.63
Rtn4Q99P72 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
Rtn4Q99P72 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC31.45■■■□□ 2.63
Rtn4Q99P72 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
Rtn4Q99P72 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC31.41■■■□□ 2.62
Rtn4Q99P72 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC31.41■■■□□ 2.62
Rtn4Q99P72 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC31.39■■■□□ 2.62
Rtn4Q99P72 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC31.36■■■□□ 2.61
Rtn4Q99P72 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC31.34■■■□□ 2.61
Rtn4Q99P72 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC31.34■■■□□ 2.61
Rtn4Q99P72 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC31.33■■■□□ 2.61
Rtn4Q99P72 Gm43863-201ENSMUST00000203822 1192 ntBASIC31.33■■■□□ 2.61
Rtn4Q99P72 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC31.31■■■□□ 2.6
Rtn4Q99P72 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
Rtn4Q99P72 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
Rtn4Q99P72 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC31.31■■■□□ 2.6
Rtn4Q99P72 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
Rtn4Q99P72 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC31.29■■■□□ 2.6
Rtn4Q99P72 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
Rtn4Q99P72 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
Rtn4Q99P72 Gm6658-202ENSMUST00000209493 1885 ntBASIC31.27■■■□□ 2.6
Rtn4Q99P72 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC31.26■■■□□ 2.6
Rtn4Q99P72 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC31.26■■■□□ 2.6
Rtn4Q99P72 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
Rtn4Q99P72 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
Rtn4Q99P72 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC31.22■■■□□ 2.59
Rtn4Q99P72 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC31.2■■■□□ 2.58
Rtn4Q99P72 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
Rtn4Q99P72 Gm9939-201ENSMUST00000067161 1154 ntBASIC31.18■■■□□ 2.58
Rtn4Q99P72 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC31.17■■■□□ 2.58
Rtn4Q99P72 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
Rtn4Q99P72 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
Rtn4Q99P72 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.57
Rtn4Q99P72 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC31.13■■■□□ 2.57
Rtn4Q99P72 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC31.13■■■□□ 2.57
Rtn4Q99P72 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC31.12■■■□□ 2.57
Rtn4Q99P72 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC31.11■■■□□ 2.57
Rtn4Q99P72 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC31.11■■■□□ 2.57
Rtn4Q99P72 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
Rtn4Q99P72 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
Rtn4Q99P72 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC31.09■■■□□ 2.57
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms