Protein–RNA interactions for Protein: Q923P0

Col20a1, Collagen alpha-1(XX) chain, mousemouse

Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1Q923P0 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC30.63■■■□□ 2.49
Col20a1Q923P0 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC30.62■■■□□ 2.49
Col20a1Q923P0 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC30.62■■■□□ 2.49
Col20a1Q923P0 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC30.62■■■□□ 2.49
Col20a1Q923P0 Gm2415-204ENSMUST00000190235 2004 ntBASIC30.61■■■□□ 2.49
Col20a1Q923P0 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
Col20a1Q923P0 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC30.61■■■□□ 2.49
Col20a1Q923P0 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC30.58■■■□□ 2.49
Col20a1Q923P0 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC30.56■■■□□ 2.48
Col20a1Q923P0 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC30.56■■■□□ 2.48
Col20a1Q923P0 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
Col20a1Q923P0 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC30.55■■■□□ 2.48
Col20a1Q923P0 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC30.55■■■□□ 2.48
Col20a1Q923P0 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC30.55■■■□□ 2.48
Col20a1Q923P0 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC30.52■■■□□ 2.48
Col20a1Q923P0 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
Col20a1Q923P0 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC30.52■■■□□ 2.48
Col20a1Q923P0 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
Col20a1Q923P0 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
Col20a1Q923P0 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.48
Col20a1Q923P0 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC30.5■■■□□ 2.47
Col20a1Q923P0 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
Col20a1Q923P0 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
Col20a1Q923P0 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC30.49■■■□□ 2.47
Col20a1Q923P0 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC30.49■■■□□ 2.47
Col20a1Q923P0 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC30.49■■■□□ 2.47
Col20a1Q923P0 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
Col20a1Q923P0 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC30.48■■■□□ 2.47
Col20a1Q923P0 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
Col20a1Q923P0 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC30.45■■■□□ 2.47
Col20a1Q923P0 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.47
Col20a1Q923P0 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.46
Col20a1Q923P0 Gm24970-201ENSMUST00000175582 82 ntBASIC30.45■■■□□ 2.46
Col20a1Q923P0 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC30.44■■■□□ 2.46
Col20a1Q923P0 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC30.43■■■□□ 2.46
Col20a1Q923P0 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
Col20a1Q923P0 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC30.43■■■□□ 2.46
Col20a1Q923P0 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
Col20a1Q923P0 Gm6658-202ENSMUST00000209493 1885 ntBASIC30.4■■■□□ 2.46
Col20a1Q923P0 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC30.4■■■□□ 2.46
Col20a1Q923P0 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
Col20a1Q923P0 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC30.39■■■□□ 2.46
Col20a1Q923P0 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC30.39■■■□□ 2.46
Col20a1Q923P0 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC30.38■■■□□ 2.45
Col20a1Q923P0 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC30.37■■■□□ 2.45
Col20a1Q923P0 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
Col20a1Q923P0 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
Col20a1Q923P0 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
Col20a1Q923P0 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC30.34■■■□□ 2.45
Col20a1Q923P0 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC30.34■■■□□ 2.45
Col20a1Q923P0 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC30.33■■■□□ 2.45
Col20a1Q923P0 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
Col20a1Q923P0 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
Col20a1Q923P0 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
Col20a1Q923P0 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC30.26■■■□□ 2.43
Col20a1Q923P0 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC30.24■■■□□ 2.43
Col20a1Q923P0 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
Col20a1Q923P0 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
Col20a1Q923P0 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC30.22■■■□□ 2.43
Col20a1Q923P0 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
Col20a1Q923P0 Gm43863-201ENSMUST00000203822 1192 ntBASIC30.22■■■□□ 2.43
Col20a1Q923P0 Gm30346-201ENSMUST00000218641 1699 ntBASIC30.21■■■□□ 2.43
Col20a1Q923P0 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC30.21■■■□□ 2.43
Col20a1Q923P0 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC30.21■■■□□ 2.43
Col20a1Q923P0 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC30.2■■■□□ 2.42
Col20a1Q923P0 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
Col20a1Q923P0 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC30.19■■■□□ 2.42
Col20a1Q923P0 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC30.19■■■□□ 2.42
Col20a1Q923P0 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC30.18■■■□□ 2.42
Col20a1Q923P0 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
Col20a1Q923P0 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
Col20a1Q923P0 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
Col20a1Q923P0 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
Col20a1Q923P0 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC30.12■■■□□ 2.41
Col20a1Q923P0 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC30.11■■■□□ 2.41
Col20a1Q923P0 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
Col20a1Q923P0 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC30.1■■■□□ 2.41
Col20a1Q923P0 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
Col20a1Q923P0 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
Col20a1Q923P0 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC30.1■■■□□ 2.41
Col20a1Q923P0 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC30.09■■■□□ 2.41
Col20a1Q923P0 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
Col20a1Q923P0 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
Col20a1Q923P0 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
Col20a1Q923P0 AC157572.2-201ENSMUST00000226970 908 ntBASIC30.04■■■□□ 2.4
Col20a1Q923P0 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC30.02■■■□□ 2.4
Col20a1Q923P0 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC30.02■■■□□ 2.4
Col20a1Q923P0 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC30.01■■■□□ 2.39
Col20a1Q923P0 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
Col20a1Q923P0 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC29.99■■■□□ 2.39
Col20a1Q923P0 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
Col20a1Q923P0 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC29.98■■■□□ 2.39
Col20a1Q923P0 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC29.98■■■□□ 2.39
Col20a1Q923P0 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC29.98■■■□□ 2.39
Col20a1Q923P0 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC29.96■■■□□ 2.39
Col20a1Q923P0 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC29.94■■■□□ 2.38
Col20a1Q923P0 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
Col20a1Q923P0 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
Col20a1Q923P0 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
Col20a1Q923P0 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms