Protein–RNA interactions for Protein: Q91Y00

Pcdhb2, Protocadherin beta 2, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb2Q91Y00 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
Pcdhb2Q91Y00 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
Pcdhb2Q91Y00 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC27.02■■□□□ 1.92
Pcdhb2Q91Y00 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC27■■□□□ 1.91
Pcdhb2Q91Y00 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC27■■□□□ 1.91
Pcdhb2Q91Y00 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC27■■□□□ 1.91
Pcdhb2Q91Y00 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
Pcdhb2Q91Y00 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC26.98■■□□□ 1.91
Pcdhb2Q91Y00 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
Pcdhb2Q91Y00 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC26.98■■□□□ 1.91
Pcdhb2Q91Y00 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.91
Pcdhb2Q91Y00 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
Pcdhb2Q91Y00 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
Pcdhb2Q91Y00 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
Pcdhb2Q91Y00 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC26.89■■□□□ 1.9
Pcdhb2Q91Y00 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC26.88■■□□□ 1.89
Pcdhb2Q91Y00 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
Pcdhb2Q91Y00 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
Pcdhb2Q91Y00 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC26.86■■□□□ 1.89
Pcdhb2Q91Y00 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
Pcdhb2Q91Y00 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
Pcdhb2Q91Y00 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC26.83■■□□□ 1.89
Pcdhb2Q91Y00 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
Pcdhb2Q91Y00 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
Pcdhb2Q91Y00 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Pcdhb2Q91Y00 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC26.8■■□□□ 1.88
Pcdhb2Q91Y00 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
Pcdhb2Q91Y00 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
Pcdhb2Q91Y00 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
Pcdhb2Q91Y00 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC26.77■■□□□ 1.88
Pcdhb2Q91Y00 Gm45855-201ENSMUST00000212546 880 ntBASIC26.77■■□□□ 1.88
Pcdhb2Q91Y00 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
Pcdhb2Q91Y00 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC26.74■■□□□ 1.87
Pcdhb2Q91Y00 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
Pcdhb2Q91Y00 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC26.72■■□□□ 1.87
Pcdhb2Q91Y00 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
Pcdhb2Q91Y00 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
Pcdhb2Q91Y00 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC26.71■■□□□ 1.87
Pcdhb2Q91Y00 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
Pcdhb2Q91Y00 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC26.71■■□□□ 1.87
Pcdhb2Q91Y00 Gm9397-201ENSMUST00000200125 605 ntBASIC26.7■■□□□ 1.86
Pcdhb2Q91Y00 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
Pcdhb2Q91Y00 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
Pcdhb2Q91Y00 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Pcdhb2Q91Y00 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC26.66■■□□□ 1.86
Pcdhb2Q91Y00 Gm30346-201ENSMUST00000218641 1699 ntBASIC26.66■■□□□ 1.86
Pcdhb2Q91Y00 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
Pcdhb2Q91Y00 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC26.63■■□□□ 1.85
Pcdhb2Q91Y00 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC26.63■■□□□ 1.85
Pcdhb2Q91Y00 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
Pcdhb2Q91Y00 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC26.62■■□□□ 1.85
Pcdhb2Q91Y00 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC26.61■■□□□ 1.85
Pcdhb2Q91Y00 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC26.61■■□□□ 1.85
Pcdhb2Q91Y00 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC26.6■■□□□ 1.85
Pcdhb2Q91Y00 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC26.59■■□□□ 1.85
Pcdhb2Q91Y00 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC26.59■■□□□ 1.85
Pcdhb2Q91Y00 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
Pcdhb2Q91Y00 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC26.59■■□□□ 1.85
Pcdhb2Q91Y00 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
Pcdhb2Q91Y00 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Pcdhb2Q91Y00 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Pcdhb2Q91Y00 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
Pcdhb2Q91Y00 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC26.55■■□□□ 1.84
Pcdhb2Q91Y00 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC26.54■■□□□ 1.84
Pcdhb2Q91Y00 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Pcdhb2Q91Y00 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
Pcdhb2Q91Y00 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Pcdhb2Q91Y00 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Pcdhb2Q91Y00 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Pcdhb2Q91Y00 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC26.52■■□□□ 1.84
Pcdhb2Q91Y00 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Pcdhb2Q91Y00 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Pcdhb2Q91Y00 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
Pcdhb2Q91Y00 Gm24970-201ENSMUST00000175582 82 ntBASIC26.51■■□□□ 1.83
Pcdhb2Q91Y00 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC26.51■■□□□ 1.83
Pcdhb2Q91Y00 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC26.5■■□□□ 1.83
Pcdhb2Q91Y00 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
Pcdhb2Q91Y00 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC26.49■■□□□ 1.83
Pcdhb2Q91Y00 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC26.48■■□□□ 1.83
Pcdhb2Q91Y00 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Pcdhb2Q91Y00 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC26.48■■□□□ 1.83
Pcdhb2Q91Y00 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Pcdhb2Q91Y00 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC26.47■■□□□ 1.83
Pcdhb2Q91Y00 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC26.47■■□□□ 1.83
Pcdhb2Q91Y00 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC26.47■■□□□ 1.83
Pcdhb2Q91Y00 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
Pcdhb2Q91Y00 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC26.46■■□□□ 1.83
Pcdhb2Q91Y00 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
Pcdhb2Q91Y00 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC26.45■■□□□ 1.82
Pcdhb2Q91Y00 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC26.45■■□□□ 1.82
Pcdhb2Q91Y00 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
Pcdhb2Q91Y00 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC26.44■■□□□ 1.82
Pcdhb2Q91Y00 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Pcdhb2Q91Y00 Gm43863-201ENSMUST00000203822 1192 ntBASIC26.43■■□□□ 1.82
Pcdhb2Q91Y00 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC26.43■■□□□ 1.82
Pcdhb2Q91Y00 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC26.42■■□□□ 1.82
Pcdhb2Q91Y00 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Pcdhb2Q91Y00 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Pcdhb2Q91Y00 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC26.39■■□□□ 1.82
Pcdhb2Q91Y00 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC26.39■■□□□ 1.82
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms