Protein–RNA interactions for Protein: Q91XY2

Pcdhga6, Protocadherin gamma A6, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga6Q91XY2 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.63
Pcdhga6Q91XY2 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Pcdhga6Q91XY2 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Pcdhga6Q91XY2 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC25.17■■□□□ 1.62
Pcdhga6Q91XY2 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Pcdhga6Q91XY2 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC25.14■■□□□ 1.62
Pcdhga6Q91XY2 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC25.14■■□□□ 1.61
Pcdhga6Q91XY2 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC25.13■■□□□ 1.61
Pcdhga6Q91XY2 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
Pcdhga6Q91XY2 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC25.13■■□□□ 1.61
Pcdhga6Q91XY2 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC25.12■■□□□ 1.61
Pcdhga6Q91XY2 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Pcdhga6Q91XY2 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
Pcdhga6Q91XY2 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Pcdhga6Q91XY2 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
Pcdhga6Q91XY2 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Pcdhga6Q91XY2 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC25.04■■□□□ 1.6
Pcdhga6Q91XY2 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Pcdhga6Q91XY2 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC25.02■■□□□ 1.6
Pcdhga6Q91XY2 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Pcdhga6Q91XY2 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Pcdhga6Q91XY2 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC25■■□□□ 1.59
Pcdhga6Q91XY2 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC24.99■■□□□ 1.59
Pcdhga6Q91XY2 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC24.98■■□□□ 1.59
Pcdhga6Q91XY2 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC24.98■■□□□ 1.59
Pcdhga6Q91XY2 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC24.98■■□□□ 1.59
Pcdhga6Q91XY2 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC24.96■■□□□ 1.59
Pcdhga6Q91XY2 Gm43863-201ENSMUST00000203822 1192 ntBASIC24.96■■□□□ 1.59
Pcdhga6Q91XY2 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC24.95■■□□□ 1.58
Pcdhga6Q91XY2 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
Pcdhga6Q91XY2 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Pcdhga6Q91XY2 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
Pcdhga6Q91XY2 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Pcdhga6Q91XY2 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
Pcdhga6Q91XY2 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC24.91■■□□□ 1.58
Pcdhga6Q91XY2 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Pcdhga6Q91XY2 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC24.9■■□□□ 1.58
Pcdhga6Q91XY2 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Pcdhga6Q91XY2 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
Pcdhga6Q91XY2 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
Pcdhga6Q91XY2 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC24.87■■□□□ 1.57
Pcdhga6Q91XY2 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
Pcdhga6Q91XY2 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Pcdhga6Q91XY2 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC24.86■■□□□ 1.57
Pcdhga6Q91XY2 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC24.85■■□□□ 1.57
Pcdhga6Q91XY2 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
Pcdhga6Q91XY2 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC24.81■■□□□ 1.56
Pcdhga6Q91XY2 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC24.8■■□□□ 1.56
Pcdhga6Q91XY2 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
Pcdhga6Q91XY2 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Pcdhga6Q91XY2 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC24.79■■□□□ 1.56
Pcdhga6Q91XY2 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC24.76■■□□□ 1.55
Pcdhga6Q91XY2 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC24.76■■□□□ 1.55
Pcdhga6Q91XY2 AC157572.2-201ENSMUST00000226970 908 ntBASIC24.75■■□□□ 1.55
Pcdhga6Q91XY2 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC24.75■■□□□ 1.55
Pcdhga6Q91XY2 Gm42809-201ENSMUST00000198429 1138 ntBASIC24.74■■□□□ 1.55
Pcdhga6Q91XY2 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC24.74■■□□□ 1.55
Pcdhga6Q91XY2 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC24.73■■□□□ 1.55
Pcdhga6Q91XY2 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
Pcdhga6Q91XY2 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Pcdhga6Q91XY2 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
Pcdhga6Q91XY2 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
Pcdhga6Q91XY2 Gm7432-201ENSMUST00000210343 879 ntBASIC24.7■■□□□ 1.54
Pcdhga6Q91XY2 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
Pcdhga6Q91XY2 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
Pcdhga6Q91XY2 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC24.69■■□□□ 1.54
Pcdhga6Q91XY2 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC24.69■■□□□ 1.54
Pcdhga6Q91XY2 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC24.68■■□□□ 1.54
Pcdhga6Q91XY2 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC24.68■■□□□ 1.54
Pcdhga6Q91XY2 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
Pcdhga6Q91XY2 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC24.67■■□□□ 1.54
Pcdhga6Q91XY2 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC24.66■■□□□ 1.54
Pcdhga6Q91XY2 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
Pcdhga6Q91XY2 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC24.65■■□□□ 1.54
Pcdhga6Q91XY2 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC24.65■■□□□ 1.54
Pcdhga6Q91XY2 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC24.65■■□□□ 1.54
Pcdhga6Q91XY2 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Pcdhga6Q91XY2 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
Pcdhga6Q91XY2 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
Pcdhga6Q91XY2 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
Pcdhga6Q91XY2 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC24.62■■□□□ 1.53
Pcdhga6Q91XY2 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC24.61■■□□□ 1.53
Pcdhga6Q91XY2 Nkain2-201ENSMUST00000092602 558 ntBASIC24.61■■□□□ 1.53
Pcdhga6Q91XY2 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC24.6■■□□□ 1.53
Pcdhga6Q91XY2 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Pcdhga6Q91XY2 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC24.6■■□□□ 1.53
Pcdhga6Q91XY2 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Pcdhga6Q91XY2 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Pcdhga6Q91XY2 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC24.58■■□□□ 1.53
Pcdhga6Q91XY2 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC24.58■■□□□ 1.52
Pcdhga6Q91XY2 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC24.57■■□□□ 1.52
Pcdhga6Q91XY2 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC24.57■■□□□ 1.52
Pcdhga6Q91XY2 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC24.56■■□□□ 1.52
Pcdhga6Q91XY2 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Pcdhga6Q91XY2 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Pcdhga6Q91XY2 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC24.55■■□□□ 1.52
Pcdhga6Q91XY2 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC24.55■■□□□ 1.52
Pcdhga6Q91XY2 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Pcdhga6Q91XY2 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC24.54■■□□□ 1.52
Pcdhga6Q91XY2 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC24.54■■□□□ 1.52
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms