Protein–RNA interactions for Protein: Q8VHP8

Rab40b, Ras-related protein Rab-40B, mousemouse

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab40bQ8VHP8 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Rab40bQ8VHP8 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Rab40bQ8VHP8 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Rab40bQ8VHP8 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Rab40bQ8VHP8 Fezf2-202ENSMUST00000224023 1917 ntBASIC22.7■■□□□ 1.23
Rab40bQ8VHP8 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Rab40bQ8VHP8 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Rab40bQ8VHP8 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC22.67■■□□□ 1.22
Rab40bQ8VHP8 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC22.67■■□□□ 1.22
Rab40bQ8VHP8 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC22.67■■□□□ 1.22
Rab40bQ8VHP8 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
Rab40bQ8VHP8 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Rab40bQ8VHP8 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
Rab40bQ8VHP8 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
Rab40bQ8VHP8 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Rab40bQ8VHP8 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Rab40bQ8VHP8 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Rab40bQ8VHP8 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC22.64■■□□□ 1.21
Rab40bQ8VHP8 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC22.63■■□□□ 1.21
Rab40bQ8VHP8 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Rab40bQ8VHP8 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC22.63■■□□□ 1.21
Rab40bQ8VHP8 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Rab40bQ8VHP8 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
Rab40bQ8VHP8 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Rab40bQ8VHP8 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
Rab40bQ8VHP8 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Rab40bQ8VHP8 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Rab40bQ8VHP8 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC22.6■■□□□ 1.21
Rab40bQ8VHP8 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC22.59■■□□□ 1.21
Rab40bQ8VHP8 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Rab40bQ8VHP8 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC22.58■■□□□ 1.21
Rab40bQ8VHP8 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Rab40bQ8VHP8 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Rab40bQ8VHP8 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC22.56■■□□□ 1.2
Rab40bQ8VHP8 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Rab40bQ8VHP8 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Rab40bQ8VHP8 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Rab40bQ8VHP8 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Rab40bQ8VHP8 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
Rab40bQ8VHP8 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
Rab40bQ8VHP8 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC22.53■■□□□ 1.2
Rab40bQ8VHP8 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC22.52■■□□□ 1.2
Rab40bQ8VHP8 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC22.52■■□□□ 1.2
Rab40bQ8VHP8 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.19
Rab40bQ8VHP8 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Rab40bQ8VHP8 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Rab40bQ8VHP8 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC22.51■■□□□ 1.19
Rab40bQ8VHP8 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC22.51■■□□□ 1.19
Rab40bQ8VHP8 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Rab40bQ8VHP8 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC22.5■■□□□ 1.19
Rab40bQ8VHP8 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Rab40bQ8VHP8 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Rab40bQ8VHP8 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Rab40bQ8VHP8 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Rab40bQ8VHP8 AC166822.3-201ENSMUST00000227394 661 ntBASIC22.47■■□□□ 1.19
Rab40bQ8VHP8 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Rab40bQ8VHP8 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
Rab40bQ8VHP8 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Rab40bQ8VHP8 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Rab40bQ8VHP8 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC22.45■■□□□ 1.18
Rab40bQ8VHP8 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Rab40bQ8VHP8 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Rab40bQ8VHP8 Gm25262-201ENSMUST00000174934 133 ntBASIC22.44■■□□□ 1.18
Rab40bQ8VHP8 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Rab40bQ8VHP8 Gm30346-201ENSMUST00000218641 1699 ntBASIC22.44■■□□□ 1.18
Rab40bQ8VHP8 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC22.42■■□□□ 1.18
Rab40bQ8VHP8 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Rab40bQ8VHP8 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Rab40bQ8VHP8 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Rab40bQ8VHP8 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Rab40bQ8VHP8 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC22.4■■□□□ 1.18
Rab40bQ8VHP8 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC22.4■■□□□ 1.18
Rab40bQ8VHP8 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Rab40bQ8VHP8 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC22.39■■□□□ 1.17
Rab40bQ8VHP8 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
Rab40bQ8VHP8 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Rab40bQ8VHP8 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC22.37■■□□□ 1.17
Rab40bQ8VHP8 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Rab40bQ8VHP8 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Rab40bQ8VHP8 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC22.36■■□□□ 1.17
Rab40bQ8VHP8 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC22.36■■□□□ 1.17
Rab40bQ8VHP8 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Rab40bQ8VHP8 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Rab40bQ8VHP8 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
Rab40bQ8VHP8 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Rab40bQ8VHP8 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
Rab40bQ8VHP8 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Rab40bQ8VHP8 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Rab40bQ8VHP8 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Rab40bQ8VHP8 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Rab40bQ8VHP8 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Rab40bQ8VHP8 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Rab40bQ8VHP8 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
Rab40bQ8VHP8 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Rab40bQ8VHP8 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
Rab40bQ8VHP8 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Rab40bQ8VHP8 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Rab40bQ8VHP8 Gm27322-201ENSMUST00000184007 104 ntBASIC22.27■■□□□ 1.16
Rab40bQ8VHP8 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC22.27■■□□□ 1.16
Rab40bQ8VHP8 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms