Protein–RNA interactions for Protein: Q8VEK3

Hnrnpu, Heterogeneous nuclear ribonucleoprotein U, mousemouse

Known RBP Predictions only

Length 800 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HnrnpuQ8VEK3 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
HnrnpuQ8VEK3 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC31.66■■■□□ 2.66
HnrnpuQ8VEK3 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
HnrnpuQ8VEK3 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC31.65■■■□□ 2.66
HnrnpuQ8VEK3 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC31.65■■■□□ 2.66
HnrnpuQ8VEK3 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC31.62■■■□□ 2.65
HnrnpuQ8VEK3 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
HnrnpuQ8VEK3 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC31.61■■■□□ 2.65
HnrnpuQ8VEK3 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC31.61■■■□□ 2.65
HnrnpuQ8VEK3 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
HnrnpuQ8VEK3 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
HnrnpuQ8VEK3 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
HnrnpuQ8VEK3 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC31.59■■■□□ 2.65
HnrnpuQ8VEK3 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
HnrnpuQ8VEK3 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC31.58■■■□□ 2.65
HnrnpuQ8VEK3 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC31.57■■■□□ 2.65
HnrnpuQ8VEK3 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC31.57■■■□□ 2.64
HnrnpuQ8VEK3 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
HnrnpuQ8VEK3 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
HnrnpuQ8VEK3 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
HnrnpuQ8VEK3 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
HnrnpuQ8VEK3 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC31.54■■■□□ 2.64
HnrnpuQ8VEK3 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
HnrnpuQ8VEK3 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC31.53■■■□□ 2.64
HnrnpuQ8VEK3 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC31.53■■■□□ 2.64
HnrnpuQ8VEK3 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC31.53■■■□□ 2.64
HnrnpuQ8VEK3 Gm30346-201ENSMUST00000218641 1699 ntBASIC31.52■■■□□ 2.64
HnrnpuQ8VEK3 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.64
HnrnpuQ8VEK3 Gm16148-201ENSMUST00000119653 893 ntBASIC31.51■■■□□ 2.63
HnrnpuQ8VEK3 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC31.51■■■□□ 2.63
HnrnpuQ8VEK3 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC31.5■■■□□ 2.63
HnrnpuQ8VEK3 Gm6345-201ENSMUST00000180378 1691 ntBASIC31.5■■■□□ 2.63
HnrnpuQ8VEK3 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC31.45■■■□□ 2.62
HnrnpuQ8VEK3 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
HnrnpuQ8VEK3 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC31.44■■■□□ 2.62
HnrnpuQ8VEK3 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
HnrnpuQ8VEK3 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC31.42■■■□□ 2.62
HnrnpuQ8VEK3 Zxda-201ENSMUST00000117281 2621 ntBASIC31.41■■■□□ 2.62
HnrnpuQ8VEK3 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
HnrnpuQ8VEK3 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC31.41■■■□□ 2.62
HnrnpuQ8VEK3 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
HnrnpuQ8VEK3 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
HnrnpuQ8VEK3 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
HnrnpuQ8VEK3 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC31.36■■■□□ 2.61
HnrnpuQ8VEK3 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
HnrnpuQ8VEK3 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
HnrnpuQ8VEK3 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
HnrnpuQ8VEK3 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
HnrnpuQ8VEK3 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC31.33■■■□□ 2.61
HnrnpuQ8VEK3 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
HnrnpuQ8VEK3 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
HnrnpuQ8VEK3 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC31.31■■■□□ 2.6
HnrnpuQ8VEK3 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
HnrnpuQ8VEK3 Gm9905-201ENSMUST00000065740 1845 ntBASIC31.29■■■□□ 2.6
HnrnpuQ8VEK3 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
HnrnpuQ8VEK3 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
HnrnpuQ8VEK3 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
HnrnpuQ8VEK3 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
HnrnpuQ8VEK3 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
HnrnpuQ8VEK3 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
HnrnpuQ8VEK3 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC31.22■■■□□ 2.59
HnrnpuQ8VEK3 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC31.22■■■□□ 2.59
HnrnpuQ8VEK3 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC31.21■■■□□ 2.59
HnrnpuQ8VEK3 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC31.2■■■□□ 2.58
HnrnpuQ8VEK3 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC31.19■■■□□ 2.58
HnrnpuQ8VEK3 Gm6206-201ENSMUST00000133472 2199 ntBASIC31.19■■■□□ 2.58
HnrnpuQ8VEK3 Gm43445-201ENSMUST00000198564 2091 ntBASIC31.18■■■□□ 2.58
HnrnpuQ8VEK3 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC31.18■■■□□ 2.58
HnrnpuQ8VEK3 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
HnrnpuQ8VEK3 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC31.18■■■□□ 2.58
HnrnpuQ8VEK3 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC31.16■■■□□ 2.58
HnrnpuQ8VEK3 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
HnrnpuQ8VEK3 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC31.15■■■□□ 2.58
HnrnpuQ8VEK3 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
HnrnpuQ8VEK3 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
HnrnpuQ8VEK3 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
HnrnpuQ8VEK3 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
HnrnpuQ8VEK3 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
HnrnpuQ8VEK3 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC31.1■■■□□ 2.57
HnrnpuQ8VEK3 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
HnrnpuQ8VEK3 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
HnrnpuQ8VEK3 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
HnrnpuQ8VEK3 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
HnrnpuQ8VEK3 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
HnrnpuQ8VEK3 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC31.08■■■□□ 2.57
HnrnpuQ8VEK3 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
HnrnpuQ8VEK3 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
HnrnpuQ8VEK3 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
HnrnpuQ8VEK3 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC31.06■■■□□ 2.56
HnrnpuQ8VEK3 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC31.06■■■□□ 2.56
HnrnpuQ8VEK3 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC31.02■■■□□ 2.56
HnrnpuQ8VEK3 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
HnrnpuQ8VEK3 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
HnrnpuQ8VEK3 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC31■■■□□ 2.55
HnrnpuQ8VEK3 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC30.99■■■□□ 2.55
HnrnpuQ8VEK3 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC30.98■■■□□ 2.55
HnrnpuQ8VEK3 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC30.98■■■□□ 2.55
HnrnpuQ8VEK3 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
HnrnpuQ8VEK3 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
HnrnpuQ8VEK3 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
Retrieved 100 of 76,532 protein–RNA pairs in 12.4 ms