Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC23.91■■□□□ 1.42
Ndc1Q8VCB1 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC23.89■■□□□ 1.42
Ndc1Q8VCB1 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC23.89■■□□□ 1.42
Ndc1Q8VCB1 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC23.87■■□□□ 1.41
Ndc1Q8VCB1 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC23.87■■□□□ 1.41
Ndc1Q8VCB1 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC23.86■■□□□ 1.41
Ndc1Q8VCB1 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC23.84■■□□□ 1.41
Ndc1Q8VCB1 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC23.84■■□□□ 1.41
Ndc1Q8VCB1 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Ndc1Q8VCB1 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Ndc1Q8VCB1 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
Ndc1Q8VCB1 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC23.82■■□□□ 1.4
Ndc1Q8VCB1 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC23.82■■□□□ 1.4
Ndc1Q8VCB1 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
Ndc1Q8VCB1 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Ndc1Q8VCB1 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Ndc1Q8VCB1 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC23.8■■□□□ 1.4
Ndc1Q8VCB1 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Ndc1Q8VCB1 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC23.79■■□□□ 1.4
Ndc1Q8VCB1 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
Ndc1Q8VCB1 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Ndc1Q8VCB1 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
Ndc1Q8VCB1 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
Ndc1Q8VCB1 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Ndc1Q8VCB1 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC23.78■■□□□ 1.4
Ndc1Q8VCB1 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC23.77■■□□□ 1.4
Ndc1Q8VCB1 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Ndc1Q8VCB1 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC23.76■■□□□ 1.39
Ndc1Q8VCB1 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC23.75■■□□□ 1.39
Ndc1Q8VCB1 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
Ndc1Q8VCB1 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC23.74■■□□□ 1.39
Ndc1Q8VCB1 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Ndc1Q8VCB1 Gm2415-204ENSMUST00000190235 2004 ntBASIC23.73■■□□□ 1.39
Ndc1Q8VCB1 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC23.72■■□□□ 1.39
Ndc1Q8VCB1 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Ndc1Q8VCB1 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Ndc1Q8VCB1 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Ndc1Q8VCB1 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Ndc1Q8VCB1 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC23.71■■□□□ 1.39
Ndc1Q8VCB1 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
Ndc1Q8VCB1 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Ndc1Q8VCB1 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC23.7■■□□□ 1.38
Ndc1Q8VCB1 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Ndc1Q8VCB1 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC23.69■■□□□ 1.38
Ndc1Q8VCB1 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Ndc1Q8VCB1 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC23.68■■□□□ 1.38
Ndc1Q8VCB1 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Ndc1Q8VCB1 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
Ndc1Q8VCB1 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Ndc1Q8VCB1 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC23.67■■□□□ 1.38
Ndc1Q8VCB1 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC23.67■■□□□ 1.38
Ndc1Q8VCB1 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC23.67■■□□□ 1.38
Ndc1Q8VCB1 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Ndc1Q8VCB1 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC23.66■■□□□ 1.38
Ndc1Q8VCB1 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Ndc1Q8VCB1 Gm24970-201ENSMUST00000175582 82 ntBASIC23.66■■□□□ 1.38
Ndc1Q8VCB1 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Ndc1Q8VCB1 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Ndc1Q8VCB1 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.37
Ndc1Q8VCB1 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC23.64■■□□□ 1.37
Ndc1Q8VCB1 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC23.62■■□□□ 1.37
Ndc1Q8VCB1 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC23.62■■□□□ 1.37
Ndc1Q8VCB1 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC23.61■■□□□ 1.37
Ndc1Q8VCB1 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
Ndc1Q8VCB1 AC153504.1-201ENSMUST00000218379 2290 ntBASIC23.6■■□□□ 1.37
Ndc1Q8VCB1 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
Ndc1Q8VCB1 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC23.57■■□□□ 1.36
Ndc1Q8VCB1 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Ndc1Q8VCB1 Gm6658-202ENSMUST00000209493 1885 ntBASIC23.56■■□□□ 1.36
Ndc1Q8VCB1 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
Ndc1Q8VCB1 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
Ndc1Q8VCB1 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC23.53■■□□□ 1.36
Ndc1Q8VCB1 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Ndc1Q8VCB1 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Ndc1Q8VCB1 Gm43863-201ENSMUST00000203822 1192 ntBASIC23.5■■□□□ 1.35
Ndc1Q8VCB1 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
Ndc1Q8VCB1 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Ndc1Q8VCB1 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
Ndc1Q8VCB1 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC23.48■■□□□ 1.35
Ndc1Q8VCB1 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
Ndc1Q8VCB1 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC23.47■■□□□ 1.35
Ndc1Q8VCB1 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Ndc1Q8VCB1 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Ndc1Q8VCB1 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC23.42■■□□□ 1.34
Ndc1Q8VCB1 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC23.42■■□□□ 1.34
Ndc1Q8VCB1 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
Ndc1Q8VCB1 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Ndc1Q8VCB1 Gm30346-201ENSMUST00000218641 1699 ntBASIC23.41■■□□□ 1.34
Ndc1Q8VCB1 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
Ndc1Q8VCB1 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC23.4■■□□□ 1.34
Ndc1Q8VCB1 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC23.4■■□□□ 1.34
Ndc1Q8VCB1 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
Ndc1Q8VCB1 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC23.39■■□□□ 1.33
Ndc1Q8VCB1 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC23.39■■□□□ 1.33
Ndc1Q8VCB1 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC23.38■■□□□ 1.33
Ndc1Q8VCB1 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC23.38■■□□□ 1.33
Ndc1Q8VCB1 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC23.37■■□□□ 1.33
Ndc1Q8VCB1 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Ndc1Q8VCB1 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Ndc1Q8VCB1 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
Retrieved 100 of 76,532 protein–RNA pairs in 12.5 ms