Protein–RNA interactions for Protein: Q8R550

Sh3kbp1, SH3 domain-containing kinase-binding protein 1, mousemouse

Known RBP Predictions only

Length 709 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3kbp1Q8R550 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Sh3kbp1Q8R550 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Sh3kbp1Q8R550 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC26.04■■□□□ 1.76
Sh3kbp1Q8R550 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC26.03■■□□□ 1.76
Sh3kbp1Q8R550 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
Sh3kbp1Q8R550 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC26.03■■□□□ 1.76
Sh3kbp1Q8R550 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC26.02■■□□□ 1.76
Sh3kbp1Q8R550 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC26■■□□□ 1.75
Sh3kbp1Q8R550 Gm9397-201ENSMUST00000200125 605 ntBASIC26■■□□□ 1.75
Sh3kbp1Q8R550 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Sh3kbp1Q8R550 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
Sh3kbp1Q8R550 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC25.98■■□□□ 1.75
Sh3kbp1Q8R550 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
Sh3kbp1Q8R550 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC25.97■■□□□ 1.75
Sh3kbp1Q8R550 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Sh3kbp1Q8R550 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
Sh3kbp1Q8R550 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
Sh3kbp1Q8R550 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC25.93■■□□□ 1.74
Sh3kbp1Q8R550 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC25.93■■□□□ 1.74
Sh3kbp1Q8R550 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC25.92■■□□□ 1.74
Sh3kbp1Q8R550 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
Sh3kbp1Q8R550 AC153504.1-201ENSMUST00000218379 2290 ntBASIC25.91■■□□□ 1.74
Sh3kbp1Q8R550 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
Sh3kbp1Q8R550 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
Sh3kbp1Q8R550 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC25.89■■□□□ 1.74
Sh3kbp1Q8R550 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC25.89■■□□□ 1.74
Sh3kbp1Q8R550 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC25.89■■□□□ 1.74
Sh3kbp1Q8R550 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC25.87■■□□□ 1.73
Sh3kbp1Q8R550 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
Sh3kbp1Q8R550 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
Sh3kbp1Q8R550 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC25.87■■□□□ 1.73
Sh3kbp1Q8R550 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
Sh3kbp1Q8R550 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC25.86■■□□□ 1.73
Sh3kbp1Q8R550 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
Sh3kbp1Q8R550 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC25.86■■□□□ 1.73
Sh3kbp1Q8R550 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC25.85■■□□□ 1.73
Sh3kbp1Q8R550 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC25.84■■□□□ 1.73
Sh3kbp1Q8R550 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC25.84■■□□□ 1.73
Sh3kbp1Q8R550 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
Sh3kbp1Q8R550 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
Sh3kbp1Q8R550 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
Sh3kbp1Q8R550 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC25.82■■□□□ 1.72
Sh3kbp1Q8R550 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
Sh3kbp1Q8R550 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
Sh3kbp1Q8R550 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC25.81■■□□□ 1.72
Sh3kbp1Q8R550 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC25.8■■□□□ 1.72
Sh3kbp1Q8R550 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC25.79■■□□□ 1.72
Sh3kbp1Q8R550 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC25.78■■□□□ 1.72
Sh3kbp1Q8R550 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC25.78■■□□□ 1.72
Sh3kbp1Q8R550 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
Sh3kbp1Q8R550 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC25.77■■□□□ 1.72
Sh3kbp1Q8R550 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
Sh3kbp1Q8R550 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC25.77■■□□□ 1.72
Sh3kbp1Q8R550 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
Sh3kbp1Q8R550 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
Sh3kbp1Q8R550 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
Sh3kbp1Q8R550 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC25.76■■□□□ 1.71
Sh3kbp1Q8R550 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
Sh3kbp1Q8R550 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC25.75■■□□□ 1.71
Sh3kbp1Q8R550 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC25.74■■□□□ 1.71
Sh3kbp1Q8R550 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Sh3kbp1Q8R550 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
Sh3kbp1Q8R550 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC25.73■■□□□ 1.71
Sh3kbp1Q8R550 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
Sh3kbp1Q8R550 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
Sh3kbp1Q8R550 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC25.71■■□□□ 1.71
Sh3kbp1Q8R550 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC25.7■■□□□ 1.71
Sh3kbp1Q8R550 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.71
Sh3kbp1Q8R550 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
Sh3kbp1Q8R550 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC25.68■■□□□ 1.7
Sh3kbp1Q8R550 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC25.67■■□□□ 1.7
Sh3kbp1Q8R550 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC25.67■■□□□ 1.7
Sh3kbp1Q8R550 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Sh3kbp1Q8R550 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Sh3kbp1Q8R550 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC25.66■■□□□ 1.7
Sh3kbp1Q8R550 Gm24970-201ENSMUST00000175582 82 ntBASIC25.66■■□□□ 1.7
Sh3kbp1Q8R550 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
Sh3kbp1Q8R550 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Sh3kbp1Q8R550 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Sh3kbp1Q8R550 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC25.65■■□□□ 1.7
Sh3kbp1Q8R550 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
Sh3kbp1Q8R550 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Sh3kbp1Q8R550 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
Sh3kbp1Q8R550 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
Sh3kbp1Q8R550 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC25.62■■□□□ 1.69
Sh3kbp1Q8R550 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Sh3kbp1Q8R550 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
Sh3kbp1Q8R550 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
Sh3kbp1Q8R550 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC25.61■■□□□ 1.69
Sh3kbp1Q8R550 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Sh3kbp1Q8R550 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC25.61■■□□□ 1.69
Sh3kbp1Q8R550 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Sh3kbp1Q8R550 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Sh3kbp1Q8R550 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC25.57■■□□□ 1.68
Sh3kbp1Q8R550 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Sh3kbp1Q8R550 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC25.56■■□□□ 1.68
Sh3kbp1Q8R550 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC25.56■■□□□ 1.68
Sh3kbp1Q8R550 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC25.55■■□□□ 1.68
Sh3kbp1Q8R550 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC25.54■■□□□ 1.68
Sh3kbp1Q8R550 Gm30346-201ENSMUST00000218641 1699 ntBASIC25.53■■□□□ 1.68
Retrieved 100 of 76,532 protein–RNA pairs in 142.7 ms