Protein–RNA interactions for Protein: Q8R4U6

Top1mt, DNA topoisomerase I, mitochondrial, mousemouse

Predictions only

Length 593 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Top1mtQ8R4U6 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC30.54■■■□□ 2.48
Top1mtQ8R4U6 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
Top1mtQ8R4U6 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
Top1mtQ8R4U6 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
Top1mtQ8R4U6 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
Top1mtQ8R4U6 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC30.51■■■□□ 2.47
Top1mtQ8R4U6 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC30.49■■■□□ 2.47
Top1mtQ8R4U6 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
Top1mtQ8R4U6 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC30.49■■■□□ 2.47
Top1mtQ8R4U6 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
Top1mtQ8R4U6 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC30.47■■■□□ 2.47
Top1mtQ8R4U6 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
Top1mtQ8R4U6 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
Top1mtQ8R4U6 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
Top1mtQ8R4U6 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
Top1mtQ8R4U6 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC30.45■■■□□ 2.47
Top1mtQ8R4U6 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
Top1mtQ8R4U6 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
Top1mtQ8R4U6 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC30.41■■■□□ 2.46
Top1mtQ8R4U6 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
Top1mtQ8R4U6 Gm30346-201ENSMUST00000218641 1699 ntBASIC30.39■■■□□ 2.46
Top1mtQ8R4U6 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC30.39■■■□□ 2.46
Top1mtQ8R4U6 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
Top1mtQ8R4U6 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC30.37■■■□□ 2.45
Top1mtQ8R4U6 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC30.37■■■□□ 2.45
Top1mtQ8R4U6 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC30.35■■■□□ 2.45
Top1mtQ8R4U6 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC30.35■■■□□ 2.45
Top1mtQ8R4U6 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
Top1mtQ8R4U6 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC30.34■■■□□ 2.45
Top1mtQ8R4U6 Gm16148-201ENSMUST00000119653 893 ntBASIC30.34■■■□□ 2.45
Top1mtQ8R4U6 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC30.34■■■□□ 2.45
Top1mtQ8R4U6 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
Top1mtQ8R4U6 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC30.32■■■□□ 2.44
Top1mtQ8R4U6 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC30.32■■■□□ 2.44
Top1mtQ8R4U6 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
Top1mtQ8R4U6 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC30.31■■■□□ 2.44
Top1mtQ8R4U6 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC30.3■■■□□ 2.44
Top1mtQ8R4U6 Gm6345-201ENSMUST00000180378 1691 ntBASIC30.3■■■□□ 2.44
Top1mtQ8R4U6 Zxda-201ENSMUST00000117281 2621 ntBASIC30.29■■■□□ 2.44
Top1mtQ8R4U6 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
Top1mtQ8R4U6 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC30.28■■■□□ 2.44
Top1mtQ8R4U6 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
Top1mtQ8R4U6 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC30.27■■■□□ 2.44
Top1mtQ8R4U6 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
Top1mtQ8R4U6 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
Top1mtQ8R4U6 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
Top1mtQ8R4U6 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
Top1mtQ8R4U6 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.42
Top1mtQ8R4U6 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
Top1mtQ8R4U6 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
Top1mtQ8R4U6 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
Top1mtQ8R4U6 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
Top1mtQ8R4U6 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
Top1mtQ8R4U6 Gm6206-201ENSMUST00000133472 2199 ntBASIC30.15■■■□□ 2.42
Top1mtQ8R4U6 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC30.15■■■□□ 2.42
Top1mtQ8R4U6 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
Top1mtQ8R4U6 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC30.14■■■□□ 2.42
Top1mtQ8R4U6 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC30.13■■■□□ 2.41
Top1mtQ8R4U6 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC30.12■■■□□ 2.41
Top1mtQ8R4U6 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC30.12■■■□□ 2.41
Top1mtQ8R4U6 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
Top1mtQ8R4U6 Gm9905-201ENSMUST00000065740 1845 ntBASIC30.12■■■□□ 2.41
Top1mtQ8R4U6 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC30.11■■■□□ 2.41
Top1mtQ8R4U6 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
Top1mtQ8R4U6 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
Top1mtQ8R4U6 Gm43445-201ENSMUST00000198564 2091 ntBASIC30.09■■■□□ 2.41
Top1mtQ8R4U6 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC30.08■■■□□ 2.41
Top1mtQ8R4U6 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
Top1mtQ8R4U6 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
Top1mtQ8R4U6 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC30.05■■■□□ 2.4
Top1mtQ8R4U6 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC30.04■■■□□ 2.4
Top1mtQ8R4U6 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC30.04■■■□□ 2.4
Top1mtQ8R4U6 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
Top1mtQ8R4U6 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC30.01■■■□□ 2.39
Top1mtQ8R4U6 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC30.01■■■□□ 2.39
Top1mtQ8R4U6 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
Top1mtQ8R4U6 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
Top1mtQ8R4U6 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC29.99■■■□□ 2.39
Top1mtQ8R4U6 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC29.98■■■□□ 2.39
Top1mtQ8R4U6 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC29.98■■■□□ 2.39
Top1mtQ8R4U6 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
Top1mtQ8R4U6 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
Top1mtQ8R4U6 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.39
Top1mtQ8R4U6 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC29.95■■■□□ 2.39
Top1mtQ8R4U6 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC29.95■■■□□ 2.38
Top1mtQ8R4U6 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.38
Top1mtQ8R4U6 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC29.93■■■□□ 2.38
Top1mtQ8R4U6 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC29.93■■■□□ 2.38
Top1mtQ8R4U6 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
Top1mtQ8R4U6 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC29.92■■■□□ 2.38
Top1mtQ8R4U6 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC29.91■■■□□ 2.38
Top1mtQ8R4U6 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC29.91■■■□□ 2.38
Top1mtQ8R4U6 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC29.9■■■□□ 2.38
Top1mtQ8R4U6 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
Top1mtQ8R4U6 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC29.89■■■□□ 2.38
Top1mtQ8R4U6 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC29.88■■■□□ 2.37
Top1mtQ8R4U6 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC29.87■■■□□ 2.37
Top1mtQ8R4U6 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC29.87■■■□□ 2.37
Top1mtQ8R4U6 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC29.87■■■□□ 2.37
Top1mtQ8R4U6 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC29.86■■■□□ 2.37
Retrieved 100 of 76,532 protein–RNA pairs in 125.4 ms