Protein–RNA interactions for Protein: Q8R4G9

Chrna3, Neuronal acetylcholine receptor subunit alpha-3, mousemouse

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna3Q8R4G9 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC25.01■■□□□ 1.59
Chrna3Q8R4G9 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC25.01■■□□□ 1.59
Chrna3Q8R4G9 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC25■■□□□ 1.59
Chrna3Q8R4G9 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC24.99■■□□□ 1.59
Chrna3Q8R4G9 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
Chrna3Q8R4G9 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC24.98■■□□□ 1.59
Chrna3Q8R4G9 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
Chrna3Q8R4G9 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Chrna3Q8R4G9 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
Chrna3Q8R4G9 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
Chrna3Q8R4G9 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC24.94■■□□□ 1.58
Chrna3Q8R4G9 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC24.93■■□□□ 1.58
Chrna3Q8R4G9 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Chrna3Q8R4G9 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
Chrna3Q8R4G9 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC24.91■■□□□ 1.58
Chrna3Q8R4G9 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC24.9■■□□□ 1.58
Chrna3Q8R4G9 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Chrna3Q8R4G9 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Chrna3Q8R4G9 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
Chrna3Q8R4G9 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Chrna3Q8R4G9 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC24.87■■□□□ 1.57
Chrna3Q8R4G9 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Chrna3Q8R4G9 Gm45855-201ENSMUST00000212546 880 ntBASIC24.85■■□□□ 1.57
Chrna3Q8R4G9 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC24.82■■□□□ 1.56
Chrna3Q8R4G9 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
Chrna3Q8R4G9 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC24.81■■□□□ 1.56
Chrna3Q8R4G9 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Chrna3Q8R4G9 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC24.8■■□□□ 1.56
Chrna3Q8R4G9 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC24.8■■□□□ 1.56
Chrna3Q8R4G9 Gm9397-201ENSMUST00000200125 605 ntBASIC24.8■■□□□ 1.56
Chrna3Q8R4G9 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC24.79■■□□□ 1.56
Chrna3Q8R4G9 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Chrna3Q8R4G9 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Chrna3Q8R4G9 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC24.79■■□□□ 1.56
Chrna3Q8R4G9 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Chrna3Q8R4G9 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Chrna3Q8R4G9 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Chrna3Q8R4G9 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
Chrna3Q8R4G9 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
Chrna3Q8R4G9 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Chrna3Q8R4G9 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC24.74■■□□□ 1.55
Chrna3Q8R4G9 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Chrna3Q8R4G9 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Chrna3Q8R4G9 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC24.73■■□□□ 1.55
Chrna3Q8R4G9 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC24.73■■□□□ 1.55
Chrna3Q8R4G9 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC24.73■■□□□ 1.55
Chrna3Q8R4G9 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC24.72■■□□□ 1.55
Chrna3Q8R4G9 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC24.71■■□□□ 1.55
Chrna3Q8R4G9 Gm30346-201ENSMUST00000218641 1699 ntBASIC24.71■■□□□ 1.55
Chrna3Q8R4G9 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC24.7■■□□□ 1.54
Chrna3Q8R4G9 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Chrna3Q8R4G9 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC24.68■■□□□ 1.54
Chrna3Q8R4G9 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Chrna3Q8R4G9 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC24.68■■□□□ 1.54
Chrna3Q8R4G9 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
Chrna3Q8R4G9 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
Chrna3Q8R4G9 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC24.64■■□□□ 1.54
Chrna3Q8R4G9 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Chrna3Q8R4G9 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
Chrna3Q8R4G9 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC24.62■■□□□ 1.53
Chrna3Q8R4G9 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC24.61■■□□□ 1.53
Chrna3Q8R4G9 Gm24970-201ENSMUST00000175582 82 ntBASIC24.61■■□□□ 1.53
Chrna3Q8R4G9 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC24.61■■□□□ 1.53
Chrna3Q8R4G9 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Chrna3Q8R4G9 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
Chrna3Q8R4G9 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Chrna3Q8R4G9 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
Chrna3Q8R4G9 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC24.6■■□□□ 1.53
Chrna3Q8R4G9 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC24.6■■□□□ 1.53
Chrna3Q8R4G9 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC24.6■■□□□ 1.53
Chrna3Q8R4G9 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC24.59■■□□□ 1.53
Chrna3Q8R4G9 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC24.59■■□□□ 1.53
Chrna3Q8R4G9 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Chrna3Q8R4G9 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
Chrna3Q8R4G9 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC24.58■■□□□ 1.53
Chrna3Q8R4G9 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Chrna3Q8R4G9 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Chrna3Q8R4G9 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Chrna3Q8R4G9 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Chrna3Q8R4G9 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC24.56■■□□□ 1.52
Chrna3Q8R4G9 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC24.56■■□□□ 1.52
Chrna3Q8R4G9 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC24.55■■□□□ 1.52
Chrna3Q8R4G9 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Chrna3Q8R4G9 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC24.54■■□□□ 1.52
Chrna3Q8R4G9 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
Chrna3Q8R4G9 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC24.53■■□□□ 1.52
Chrna3Q8R4G9 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Chrna3Q8R4G9 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Chrna3Q8R4G9 Gm43863-201ENSMUST00000203822 1192 ntBASIC24.51■■□□□ 1.51
Chrna3Q8R4G9 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
Chrna3Q8R4G9 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC24.5■■□□□ 1.51
Chrna3Q8R4G9 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Chrna3Q8R4G9 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
Chrna3Q8R4G9 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC24.48■■□□□ 1.51
Chrna3Q8R4G9 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC24.47■■□□□ 1.51
Chrna3Q8R4G9 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Chrna3Q8R4G9 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC24.45■■□□□ 1.5
Chrna3Q8R4G9 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Chrna3Q8R4G9 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
Chrna3Q8R4G9 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC24.44■■□□□ 1.5
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms