Protein–RNA interactions for Protein: Q8R3K3

Ptcd2, Pentatricopeptide repeat-containing protein 2, mitochondrial, mousemouse

Known RBP Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd2Q8R3K3 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
Ptcd2Q8R3K3 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC28■■■□□ 2.07
Ptcd2Q8R3K3 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC27.98■■■□□ 2.07
Ptcd2Q8R3K3 Gm42809-201ENSMUST00000198429 1138 ntBASIC27.98■■■□□ 2.07
Ptcd2Q8R3K3 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC27.98■■■□□ 2.07
Ptcd2Q8R3K3 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC27.97■■■□□ 2.07
Ptcd2Q8R3K3 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
Ptcd2Q8R3K3 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC27.96■■■□□ 2.07
Ptcd2Q8R3K3 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.07
Ptcd2Q8R3K3 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC27.95■■■□□ 2.06
Ptcd2Q8R3K3 Gm43863-201ENSMUST00000203822 1192 ntBASIC27.94■■■□□ 2.06
Ptcd2Q8R3K3 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC27.93■■■□□ 2.06
Ptcd2Q8R3K3 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC27.92■■■□□ 2.06
Ptcd2Q8R3K3 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC27.92■■■□□ 2.06
Ptcd2Q8R3K3 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC27.92■■■□□ 2.06
Ptcd2Q8R3K3 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC27.91■■■□□ 2.06
Ptcd2Q8R3K3 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
Ptcd2Q8R3K3 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
Ptcd2Q8R3K3 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
Ptcd2Q8R3K3 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.06
Ptcd2Q8R3K3 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.06
Ptcd2Q8R3K3 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC27.87■■■□□ 2.05
Ptcd2Q8R3K3 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC27.87■■■□□ 2.05
Ptcd2Q8R3K3 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC27.87■■■□□ 2.05
Ptcd2Q8R3K3 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC27.86■■■□□ 2.05
Ptcd2Q8R3K3 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC27.85■■■□□ 2.05
Ptcd2Q8R3K3 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC27.84■■■□□ 2.05
Ptcd2Q8R3K3 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC27.83■■■□□ 2.05
Ptcd2Q8R3K3 Cap2-205ENSMUST00000225824 1634 ntBASIC27.83■■■□□ 2.05
Ptcd2Q8R3K3 Gm15039-201ENSMUST00000118914 875 ntBASIC27.81■■■□□ 2.04
Ptcd2Q8R3K3 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
Ptcd2Q8R3K3 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
Ptcd2Q8R3K3 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
Ptcd2Q8R3K3 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC27.79■■■□□ 2.04
Ptcd2Q8R3K3 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC27.79■■■□□ 2.04
Ptcd2Q8R3K3 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC27.78■■■□□ 2.04
Ptcd2Q8R3K3 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC27.77■■■□□ 2.04
Ptcd2Q8R3K3 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
Ptcd2Q8R3K3 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC27.76■■■□□ 2.04
Ptcd2Q8R3K3 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC27.76■■■□□ 2.03
Ptcd2Q8R3K3 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC27.76■■■□□ 2.03
Ptcd2Q8R3K3 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC27.75■■■□□ 2.03
Ptcd2Q8R3K3 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC27.74■■■□□ 2.03
Ptcd2Q8R3K3 Gm11599-201ENSMUST00000118720 878 ntBASIC27.73■■■□□ 2.03
Ptcd2Q8R3K3 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC27.73■■■□□ 2.03
Ptcd2Q8R3K3 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC27.73■■■□□ 2.03
Ptcd2Q8R3K3 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC27.72■■■□□ 2.03
Ptcd2Q8R3K3 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC27.71■■■□□ 2.03
Ptcd2Q8R3K3 Gm11175-201ENSMUST00000116172 543 ntBASIC27.71■■■□□ 2.03
Ptcd2Q8R3K3 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
Ptcd2Q8R3K3 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC27.7■■■□□ 2.02
Ptcd2Q8R3K3 Nkain2-201ENSMUST00000092602 558 ntBASIC27.69■■■□□ 2.02
Ptcd2Q8R3K3 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
Ptcd2Q8R3K3 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
Ptcd2Q8R3K3 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC27.66■■■□□ 2.02
Ptcd2Q8R3K3 AC157572.2-201ENSMUST00000226970 908 ntBASIC27.65■■■□□ 2.02
Ptcd2Q8R3K3 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC27.63■■■□□ 2.01
Ptcd2Q8R3K3 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC27.61■■■□□ 2.01
Ptcd2Q8R3K3 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
Ptcd2Q8R3K3 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC27.61■■■□□ 2.01
Ptcd2Q8R3K3 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC27.61■■■□□ 2.01
Ptcd2Q8R3K3 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC27.6■■■□□ 2.01
Ptcd2Q8R3K3 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC27.59■■■□□ 2.01
Ptcd2Q8R3K3 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC27.56■■■□□ 2
Ptcd2Q8R3K3 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC27.56■■■□□ 2
Ptcd2Q8R3K3 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC27.56■■■□□ 2
Ptcd2Q8R3K3 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC27.55■■■□□ 2
Ptcd2Q8R3K3 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
Ptcd2Q8R3K3 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC27.54■■■□□ 2
Ptcd2Q8R3K3 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC27.51■■□□□ 1.99
Ptcd2Q8R3K3 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC27.5■■□□□ 1.99
Ptcd2Q8R3K3 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
Ptcd2Q8R3K3 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC27.49■■□□□ 1.99
Ptcd2Q8R3K3 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC27.49■■□□□ 1.99
Ptcd2Q8R3K3 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
Ptcd2Q8R3K3 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC27.48■■□□□ 1.99
Ptcd2Q8R3K3 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
Ptcd2Q8R3K3 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC27.46■■□□□ 1.99
Ptcd2Q8R3K3 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC27.44■■□□□ 1.98
Ptcd2Q8R3K3 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC27.43■■□□□ 1.98
Ptcd2Q8R3K3 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC27.43■■□□□ 1.98
Ptcd2Q8R3K3 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC27.41■■□□□ 1.98
Ptcd2Q8R3K3 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC27.39■■□□□ 1.98
Ptcd2Q8R3K3 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC27.39■■□□□ 1.98
Ptcd2Q8R3K3 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC27.39■■□□□ 1.97
Ptcd2Q8R3K3 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
Ptcd2Q8R3K3 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
Ptcd2Q8R3K3 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
Ptcd2Q8R3K3 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC27.34■■□□□ 1.97
Ptcd2Q8R3K3 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC27.33■■□□□ 1.97
Ptcd2Q8R3K3 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC27.31■■□□□ 1.96
Ptcd2Q8R3K3 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
Ptcd2Q8R3K3 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC27.3■■□□□ 1.96
Ptcd2Q8R3K3 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
Ptcd2Q8R3K3 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
Ptcd2Q8R3K3 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC27.28■■□□□ 1.96
Ptcd2Q8R3K3 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC27.28■■□□□ 1.96
Ptcd2Q8R3K3 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC27.28■■□□□ 1.96
Ptcd2Q8R3K3 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
Ptcd2Q8R3K3 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms