Protein–RNA interactions for Protein: Q8R1M2

H2afj, Histone H2A.J, mousemouse

Predictions only

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afjQ8R1M2 Gm43445-201ENSMUST00000198564 2091 ntBASIC23.25■■□□□ 1.31
H2afjQ8R1M2 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
H2afjQ8R1M2 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
H2afjQ8R1M2 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
H2afjQ8R1M2 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
H2afjQ8R1M2 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
H2afjQ8R1M2 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
H2afjQ8R1M2 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
H2afjQ8R1M2 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
H2afjQ8R1M2 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
H2afjQ8R1M2 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
H2afjQ8R1M2 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
H2afjQ8R1M2 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
H2afjQ8R1M2 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
H2afjQ8R1M2 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
H2afjQ8R1M2 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC23.16■■□□□ 1.3
H2afjQ8R1M2 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
H2afjQ8R1M2 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
H2afjQ8R1M2 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
H2afjQ8R1M2 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
H2afjQ8R1M2 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
H2afjQ8R1M2 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
H2afjQ8R1M2 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
H2afjQ8R1M2 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
H2afjQ8R1M2 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
H2afjQ8R1M2 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
H2afjQ8R1M2 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
H2afjQ8R1M2 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
H2afjQ8R1M2 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
H2afjQ8R1M2 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
H2afjQ8R1M2 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
H2afjQ8R1M2 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC23.05■■□□□ 1.28
H2afjQ8R1M2 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
H2afjQ8R1M2 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
H2afjQ8R1M2 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
H2afjQ8R1M2 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC23.04■■□□□ 1.28
H2afjQ8R1M2 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
H2afjQ8R1M2 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
H2afjQ8R1M2 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC23.03■■□□□ 1.28
H2afjQ8R1M2 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
H2afjQ8R1M2 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
H2afjQ8R1M2 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC23.03■■□□□ 1.28
H2afjQ8R1M2 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
H2afjQ8R1M2 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
H2afjQ8R1M2 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
H2afjQ8R1M2 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
H2afjQ8R1M2 Amer2-203ENSMUST00000225247 2662 ntBASIC22.99■■□□□ 1.27
H2afjQ8R1M2 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
H2afjQ8R1M2 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
H2afjQ8R1M2 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC22.97■■□□□ 1.27
H2afjQ8R1M2 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC22.97■■□□□ 1.27
H2afjQ8R1M2 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
H2afjQ8R1M2 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
H2afjQ8R1M2 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC22.95■■□□□ 1.26
H2afjQ8R1M2 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
H2afjQ8R1M2 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC22.95■■□□□ 1.26
H2afjQ8R1M2 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
H2afjQ8R1M2 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC22.94■■□□□ 1.26
H2afjQ8R1M2 Peli2-204ENSMUST00000226513 1320 ntBASIC22.94■■□□□ 1.26
H2afjQ8R1M2 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC22.94■■□□□ 1.26
H2afjQ8R1M2 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC22.93■■□□□ 1.26
H2afjQ8R1M2 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC22.93■■□□□ 1.26
H2afjQ8R1M2 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
H2afjQ8R1M2 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
H2afjQ8R1M2 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC22.92■■□□□ 1.26
H2afjQ8R1M2 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC22.91■■□□□ 1.26
H2afjQ8R1M2 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
H2afjQ8R1M2 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
H2afjQ8R1M2 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC22.9■■□□□ 1.26
H2afjQ8R1M2 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC22.89■■□□□ 1.26
H2afjQ8R1M2 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC22.89■■□□□ 1.26
H2afjQ8R1M2 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
H2afjQ8R1M2 Fezf2-202ENSMUST00000224023 1917 ntBASIC22.87■■□□□ 1.25
H2afjQ8R1M2 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
H2afjQ8R1M2 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC22.87■■□□□ 1.25
H2afjQ8R1M2 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC22.87■■□□□ 1.25
H2afjQ8R1M2 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC22.86■■□□□ 1.25
H2afjQ8R1M2 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC22.86■■□□□ 1.25
H2afjQ8R1M2 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
H2afjQ8R1M2 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
H2afjQ8R1M2 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC22.85■■□□□ 1.25
H2afjQ8R1M2 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC22.84■■□□□ 1.25
H2afjQ8R1M2 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
H2afjQ8R1M2 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
H2afjQ8R1M2 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
H2afjQ8R1M2 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC22.83■■□□□ 1.25
H2afjQ8R1M2 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
H2afjQ8R1M2 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
H2afjQ8R1M2 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
H2afjQ8R1M2 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
H2afjQ8R1M2 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
H2afjQ8R1M2 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
H2afjQ8R1M2 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
H2afjQ8R1M2 Gm24804-201ENSMUST00000174982 85 ntBASIC22.76■■□□□ 1.23
H2afjQ8R1M2 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC22.75■■□□□ 1.23
H2afjQ8R1M2 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
H2afjQ8R1M2 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC22.75■■□□□ 1.23
H2afjQ8R1M2 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
H2afjQ8R1M2 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC22.72■■□□□ 1.23
H2afjQ8R1M2 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Retrieved 100 of 76,532 protein–RNA pairs in 14.1 ms