Protein–RNA interactions for Protein: Q8R0S4

Cacnb4, Voltage-dependent L-type calcium channel subunit beta-4, mousemouse

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacnb4Q8R0S4 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
Cacnb4Q8R0S4 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Cacnb4Q8R0S4 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Cacnb4Q8R0S4 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC22.52■■□□□ 1.2
Cacnb4Q8R0S4 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Cacnb4Q8R0S4 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Cacnb4Q8R0S4 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Cacnb4Q8R0S4 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
Cacnb4Q8R0S4 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Cacnb4Q8R0S4 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Cacnb4Q8R0S4 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC22.47■■□□□ 1.19
Cacnb4Q8R0S4 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC22.46■■□□□ 1.19
Cacnb4Q8R0S4 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Cacnb4Q8R0S4 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
Cacnb4Q8R0S4 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Cacnb4Q8R0S4 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Cacnb4Q8R0S4 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC22.43■■□□□ 1.18
Cacnb4Q8R0S4 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Cacnb4Q8R0S4 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Cacnb4Q8R0S4 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Cacnb4Q8R0S4 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Cacnb4Q8R0S4 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Cacnb4Q8R0S4 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Cacnb4Q8R0S4 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Cacnb4Q8R0S4 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Cacnb4Q8R0S4 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC22.39■■□□□ 1.18
Cacnb4Q8R0S4 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC22.38■■□□□ 1.17
Cacnb4Q8R0S4 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Cacnb4Q8R0S4 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC22.37■■□□□ 1.17
Cacnb4Q8R0S4 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC22.37■■□□□ 1.17
Cacnb4Q8R0S4 Gm26115-201ENSMUST00000175605 87 ntBASIC22.37■■□□□ 1.17
Cacnb4Q8R0S4 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Cacnb4Q8R0S4 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Cacnb4Q8R0S4 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC22.36■■□□□ 1.17
Cacnb4Q8R0S4 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Cacnb4Q8R0S4 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Cacnb4Q8R0S4 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
Cacnb4Q8R0S4 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Cacnb4Q8R0S4 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC22.34■■□□□ 1.17
Cacnb4Q8R0S4 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC22.34■■□□□ 1.17
Cacnb4Q8R0S4 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Cacnb4Q8R0S4 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
Cacnb4Q8R0S4 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Cacnb4Q8R0S4 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.17
Cacnb4Q8R0S4 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Cacnb4Q8R0S4 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC22.32■■□□□ 1.16
Cacnb4Q8R0S4 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Cacnb4Q8R0S4 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Cacnb4Q8R0S4 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Cacnb4Q8R0S4 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Cacnb4Q8R0S4 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Cacnb4Q8R0S4 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Cacnb4Q8R0S4 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Cacnb4Q8R0S4 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
Cacnb4Q8R0S4 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Cacnb4Q8R0S4 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Cacnb4Q8R0S4 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC22.27■■□□□ 1.16
Cacnb4Q8R0S4 Fezf2-202ENSMUST00000224023 1917 ntBASIC22.26■■□□□ 1.15
Cacnb4Q8R0S4 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Cacnb4Q8R0S4 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Cacnb4Q8R0S4 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Cacnb4Q8R0S4 Gm8109-201ENSMUST00000194076 746 ntBASIC22.25■■□□□ 1.15
Cacnb4Q8R0S4 Amer2-203ENSMUST00000225247 2662 ntBASIC22.24■■□□□ 1.15
Cacnb4Q8R0S4 Gm30346-201ENSMUST00000218641 1699 ntBASIC22.23■■□□□ 1.15
Cacnb4Q8R0S4 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Cacnb4Q8R0S4 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC22.23■■□□□ 1.15
Cacnb4Q8R0S4 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Cacnb4Q8R0S4 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC22.22■■□□□ 1.15
Cacnb4Q8R0S4 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
Cacnb4Q8R0S4 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
Cacnb4Q8R0S4 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC22.2■■□□□ 1.14
Cacnb4Q8R0S4 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Cacnb4Q8R0S4 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Cacnb4Q8R0S4 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC22.19■■□□□ 1.14
Cacnb4Q8R0S4 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Cacnb4Q8R0S4 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Cacnb4Q8R0S4 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Cacnb4Q8R0S4 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Cacnb4Q8R0S4 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Cacnb4Q8R0S4 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC22.16■■□□□ 1.14
Cacnb4Q8R0S4 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Cacnb4Q8R0S4 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Cacnb4Q8R0S4 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Cacnb4Q8R0S4 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Cacnb4Q8R0S4 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Cacnb4Q8R0S4 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC22.13■■□□□ 1.13
Cacnb4Q8R0S4 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC22.12■■□□□ 1.13
Cacnb4Q8R0S4 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Cacnb4Q8R0S4 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Cacnb4Q8R0S4 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Cacnb4Q8R0S4 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC22.12■■□□□ 1.13
Cacnb4Q8R0S4 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Cacnb4Q8R0S4 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Cacnb4Q8R0S4 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Cacnb4Q8R0S4 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Cacnb4Q8R0S4 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Cacnb4Q8R0S4 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC22.08■■□□□ 1.13
Cacnb4Q8R0S4 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC22.08■■□□□ 1.12
Cacnb4Q8R0S4 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Cacnb4Q8R0S4 Peli2-204ENSMUST00000226513 1320 ntBASIC22.06■■□□□ 1.12
Retrieved 100 of 76,532 protein–RNA pairs in 8.9 ms