Protein–RNA interactions for Protein: Q8R0S1

Atf7, Cyclic AMP-dependent transcription factor ATF-7, mousemouse

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf7Q8R0S1 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
Atf7Q8R0S1 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
Atf7Q8R0S1 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
Atf7Q8R0S1 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
Atf7Q8R0S1 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC30.17■■■□□ 2.42
Atf7Q8R0S1 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC30.15■■■□□ 2.42
Atf7Q8R0S1 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
Atf7Q8R0S1 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
Atf7Q8R0S1 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC30.14■■■□□ 2.42
Atf7Q8R0S1 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
Atf7Q8R0S1 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
Atf7Q8R0S1 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC30.09■■■□□ 2.41
Atf7Q8R0S1 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC30.09■■■□□ 2.41
Atf7Q8R0S1 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
Atf7Q8R0S1 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
Atf7Q8R0S1 Gm30346-201ENSMUST00000218641 1699 ntBASIC30.07■■■□□ 2.41
Atf7Q8R0S1 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
Atf7Q8R0S1 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
Atf7Q8R0S1 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
Atf7Q8R0S1 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC30.05■■■□□ 2.4
Atf7Q8R0S1 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC30.05■■■□□ 2.4
Atf7Q8R0S1 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC30.05■■■□□ 2.4
Atf7Q8R0S1 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC30.04■■■□□ 2.4
Atf7Q8R0S1 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC30.04■■■□□ 2.4
Atf7Q8R0S1 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC30.03■■■□□ 2.4
Atf7Q8R0S1 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC30.03■■■□□ 2.4
Atf7Q8R0S1 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC30.02■■■□□ 2.4
Atf7Q8R0S1 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC30.02■■■□□ 2.4
Atf7Q8R0S1 Gm6345-201ENSMUST00000180378 1691 ntBASIC30.01■■■□□ 2.4
Atf7Q8R0S1 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC30.01■■■□□ 2.4
Atf7Q8R0S1 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC30.01■■■□□ 2.39
Atf7Q8R0S1 Zxda-201ENSMUST00000117281 2621 ntBASIC30.01■■■□□ 2.39
Atf7Q8R0S1 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC30■■■□□ 2.39
Atf7Q8R0S1 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC29.99■■■□□ 2.39
Atf7Q8R0S1 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
Atf7Q8R0S1 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
Atf7Q8R0S1 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC29.96■■■□□ 2.39
Atf7Q8R0S1 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC29.95■■■□□ 2.39
Atf7Q8R0S1 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC29.95■■■□□ 2.38
Atf7Q8R0S1 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
Atf7Q8R0S1 Gm16148-201ENSMUST00000119653 893 ntBASIC29.94■■■□□ 2.38
Atf7Q8R0S1 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC29.94■■■□□ 2.38
Atf7Q8R0S1 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
Atf7Q8R0S1 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
Atf7Q8R0S1 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC29.89■■■□□ 2.38
Atf7Q8R0S1 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC29.89■■■□□ 2.37
Atf7Q8R0S1 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC29.88■■■□□ 2.37
Atf7Q8R0S1 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC29.88■■■□□ 2.37
Atf7Q8R0S1 Gm9905-201ENSMUST00000065740 1845 ntBASIC29.87■■■□□ 2.37
Atf7Q8R0S1 Gm6206-201ENSMUST00000133472 2199 ntBASIC29.87■■■□□ 2.37
Atf7Q8R0S1 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
Atf7Q8R0S1 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
Atf7Q8R0S1 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC29.86■■■□□ 2.37
Atf7Q8R0S1 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
Atf7Q8R0S1 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC29.85■■■□□ 2.37
Atf7Q8R0S1 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC29.84■■■□□ 2.37
Atf7Q8R0S1 Gm43445-201ENSMUST00000198564 2091 ntBASIC29.81■■■□□ 2.36
Atf7Q8R0S1 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC29.81■■■□□ 2.36
Atf7Q8R0S1 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
Atf7Q8R0S1 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.35
Atf7Q8R0S1 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC29.75■■■□□ 2.35
Atf7Q8R0S1 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC29.75■■■□□ 2.35
Atf7Q8R0S1 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC29.74■■■□□ 2.35
Atf7Q8R0S1 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC29.73■■■□□ 2.35
Atf7Q8R0S1 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC29.73■■■□□ 2.35
Atf7Q8R0S1 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC29.73■■■□□ 2.35
Atf7Q8R0S1 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC29.72■■■□□ 2.35
Atf7Q8R0S1 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC29.71■■■□□ 2.35
Atf7Q8R0S1 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC29.7■■■□□ 2.35
Atf7Q8R0S1 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC29.69■■■□□ 2.34
Atf7Q8R0S1 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC29.69■■■□□ 2.34
Atf7Q8R0S1 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
Atf7Q8R0S1 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC29.67■■■□□ 2.34
Atf7Q8R0S1 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC29.66■■■□□ 2.34
Atf7Q8R0S1 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
Atf7Q8R0S1 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
Atf7Q8R0S1 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
Atf7Q8R0S1 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC29.64■■■□□ 2.34
Atf7Q8R0S1 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC29.64■■■□□ 2.34
Atf7Q8R0S1 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
Atf7Q8R0S1 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
Atf7Q8R0S1 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC29.62■■■□□ 2.33
Atf7Q8R0S1 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
Atf7Q8R0S1 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC29.61■■■□□ 2.33
Atf7Q8R0S1 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC29.6■■■□□ 2.33
Atf7Q8R0S1 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC29.59■■■□□ 2.33
Atf7Q8R0S1 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
Atf7Q8R0S1 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC29.59■■■□□ 2.33
Atf7Q8R0S1 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC29.57■■■□□ 2.32
Atf7Q8R0S1 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC29.57■■■□□ 2.32
Atf7Q8R0S1 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC29.57■■■□□ 2.32
Atf7Q8R0S1 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC29.56■■■□□ 2.32
Atf7Q8R0S1 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC29.55■■■□□ 2.32
Atf7Q8R0S1 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC29.55■■■□□ 2.32
Atf7Q8R0S1 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC29.55■■■□□ 2.32
Atf7Q8R0S1 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC29.54■■■□□ 2.32
Atf7Q8R0S1 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
Atf7Q8R0S1 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
Atf7Q8R0S1 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
Atf7Q8R0S1 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC29.51■■■□□ 2.31
Retrieved 100 of 76,532 protein–RNA pairs in 8.2 ms