Protein–RNA interactions for Protein: Q8CII9

Crlf2, Cytokine receptor-like factor 2, mousemouse

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crlf2Q8CII9 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC28,41■■■□□ 2,14
Crlf2Q8CII9 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC28,41■■■□□ 2,14
Crlf2Q8CII9 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC28,4■■■□□ 2,14
Crlf2Q8CII9 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC28,4■■■□□ 2,14
Crlf2Q8CII9 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC28,39■■■□□ 2,14
Crlf2Q8CII9 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC28,38■■■□□ 2,13
Crlf2Q8CII9 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC28,38■■■□□ 2,13
Crlf2Q8CII9 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC28,37■■■□□ 2,13
Crlf2Q8CII9 Gm43863-201ENSMUST00000203822 1192 ntBASIC28,36■■■□□ 2,13
Crlf2Q8CII9 Gm42809-201ENSMUST00000198429 1138 ntBASIC28,35■■■□□ 2,13
Crlf2Q8CII9 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC28,35■■■□□ 2,13
Crlf2Q8CII9 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC28,34■■■□□ 2,13
Crlf2Q8CII9 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC28,33■■■□□ 2,13
Crlf2Q8CII9 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC28,33■■■□□ 2,13
Crlf2Q8CII9 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC28,33■■■□□ 2,13
Crlf2Q8CII9 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC28,32■■■□□ 2,12
Crlf2Q8CII9 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC28,32■■■□□ 2,12
Crlf2Q8CII9 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC28,32■■■□□ 2,12
Crlf2Q8CII9 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC28,31■■■□□ 2,12
Crlf2Q8CII9 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC28,31■■■□□ 2,12
Crlf2Q8CII9 Gm7432-201ENSMUST00000210343 879 ntBASIC28,3■■■□□ 2,12
Crlf2Q8CII9 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC28,28■■■□□ 2,12
Crlf2Q8CII9 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC28,28■■■□□ 2,12
Crlf2Q8CII9 Mir6538-201ENSMUST00000183713 110 ntBASIC28,26■■■□□ 2,11
Crlf2Q8CII9 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC28,26■■■□□ 2,11
Crlf2Q8CII9 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC28,25■■■□□ 2,11
Crlf2Q8CII9 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC28,25■■■□□ 2,11
Crlf2Q8CII9 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC28,25■■■□□ 2,11
Crlf2Q8CII9 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC28,24■■■□□ 2,11
Crlf2Q8CII9 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC28,24■■■□□ 2,11
Crlf2Q8CII9 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC28,23■■■□□ 2,11
Crlf2Q8CII9 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC28,23■■■□□ 2,11
Crlf2Q8CII9 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC28,21■■■□□ 2,11
Crlf2Q8CII9 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC28,19■■■□□ 2,1
Crlf2Q8CII9 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC28,19■■■□□ 2,1
Crlf2Q8CII9 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC28,19■■■□□ 2,1
Crlf2Q8CII9 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC28,18■■■□□ 2,1
Crlf2Q8CII9 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC28,16■■■□□ 2,1
Crlf2Q8CII9 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC28,15■■■□□ 2,1
Crlf2Q8CII9 Cap2-205ENSMUST00000225824 1634 ntBASIC28,15■■■□□ 2,1
Crlf2Q8CII9 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC28,15■■■□□ 2,1
Crlf2Q8CII9 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC28,15■■■□□ 2,1
Crlf2Q8CII9 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC28,14■■■□□ 2,1
Crlf2Q8CII9 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC28,13■■■□□ 2,09
Crlf2Q8CII9 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC28,12■■■□□ 2,09
Crlf2Q8CII9 Gm11175-201ENSMUST00000116172 543 ntBASIC28,11■■■□□ 2,09
Crlf2Q8CII9 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC28,1■■■□□ 2,09
Crlf2Q8CII9 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC28,09■■■□□ 2,09
Crlf2Q8CII9 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC28,08■■■□□ 2,09
Crlf2Q8CII9 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC28,08■■■□□ 2,09
Crlf2Q8CII9 Nkain2-201ENSMUST00000092602 558 ntBASIC28,08■■■□□ 2,09
Crlf2Q8CII9 AC157572.2-201ENSMUST00000226970 908 ntBASIC28,07■■■□□ 2,08
Crlf2Q8CII9 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC28,07■■■□□ 2,08
Crlf2Q8CII9 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC28,06■■■□□ 2,08
Crlf2Q8CII9 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC28,04■■■□□ 2,08
Crlf2Q8CII9 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC28,04■■■□□ 2,08
Crlf2Q8CII9 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC28,04■■■□□ 2,08
Crlf2Q8CII9 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC28,03■■■□□ 2,08
Crlf2Q8CII9 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC28,03■■■□□ 2,08
Crlf2Q8CII9 Gm11599-201ENSMUST00000118720 878 ntBASIC28,03■■■□□ 2,08
Crlf2Q8CII9 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC28,02■■■□□ 2,08
Crlf2Q8CII9 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC28,02■■■□□ 2,08
Crlf2Q8CII9 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC28,02■■■□□ 2,08
Crlf2Q8CII9 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC28,01■■■□□ 2,07
Crlf2Q8CII9 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC27,99■■■□□ 2,07
Crlf2Q8CII9 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC27,97■■■□□ 2,07
Crlf2Q8CII9 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC27,97■■■□□ 2,07
Crlf2Q8CII9 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC27,96■■■□□ 2,07
Crlf2Q8CII9 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC27,96■■■□□ 2,07
Crlf2Q8CII9 Gm15039-201ENSMUST00000118914 875 ntBASIC27,94■■■□□ 2,06
Crlf2Q8CII9 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC27,94■■■□□ 2,06
Crlf2Q8CII9 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC27,94■■■□□ 2,06
Crlf2Q8CII9 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC27,93■■■□□ 2,06
Crlf2Q8CII9 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC27,93■■■□□ 2,06
Crlf2Q8CII9 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC27,91■■■□□ 2,06
Crlf2Q8CII9 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC27,91■■■□□ 2,06
Crlf2Q8CII9 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC27,89■■■□□ 2,06
Crlf2Q8CII9 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC27,88■■■□□ 2,05
Crlf2Q8CII9 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC27,87■■■□□ 2,05
Crlf2Q8CII9 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC27,86■■■□□ 2,05
Crlf2Q8CII9 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC27,85■■■□□ 2,05
Crlf2Q8CII9 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC27,82■■■□□ 2,04
Crlf2Q8CII9 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC27,81■■■□□ 2,04
Crlf2Q8CII9 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC27,8■■■□□ 2,04
Crlf2Q8CII9 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC27,8■■■□□ 2,04
Crlf2Q8CII9 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC27,79■■■□□ 2,04
Crlf2Q8CII9 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC27,76■■■□□ 2,03
Crlf2Q8CII9 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC27,76■■■□□ 2,03
Crlf2Q8CII9 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC27,76■■■□□ 2,03
Crlf2Q8CII9 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC27,75■■■□□ 2,03
Crlf2Q8CII9 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC27,75■■■□□ 2,03
Crlf2Q8CII9 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC27,72■■■□□ 2,03
Crlf2Q8CII9 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC27,7■■■□□ 2,03
Crlf2Q8CII9 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC27,7■■■□□ 2,02
Crlf2Q8CII9 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC27,7■■■□□ 2,02
Crlf2Q8CII9 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC27,67■■■□□ 2,02
Crlf2Q8CII9 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC27,67■■■□□ 2,02
Crlf2Q8CII9 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC27,66■■■□□ 2,02
Crlf2Q8CII9 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC27,65■■■□□ 2,02
Crlf2Q8CII9 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC27,65■■■□□ 2,02
Retrieved 100 of 76,532 protein–RNA pairs in 11,8 ms