Protein–RNA interactions for Protein: Q8CII9

Crlf2, Cytokine receptor-like factor 2, mousemouse

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crlf2Q8CII9 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC28.41■■■□□ 2.14
Crlf2Q8CII9 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC28.41■■■□□ 2.14
Crlf2Q8CII9 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
Crlf2Q8CII9 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
Crlf2Q8CII9 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC28.39■■■□□ 2.14
Crlf2Q8CII9 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
Crlf2Q8CII9 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
Crlf2Q8CII9 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC28.37■■■□□ 2.13
Crlf2Q8CII9 Gm43863-201ENSMUST00000203822 1192 ntBASIC28.36■■■□□ 2.13
Crlf2Q8CII9 Gm42809-201ENSMUST00000198429 1138 ntBASIC28.35■■■□□ 2.13
Crlf2Q8CII9 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
Crlf2Q8CII9 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
Crlf2Q8CII9 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
Crlf2Q8CII9 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
Crlf2Q8CII9 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
Crlf2Q8CII9 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
Crlf2Q8CII9 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
Crlf2Q8CII9 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC28.32■■■□□ 2.12
Crlf2Q8CII9 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC28.31■■■□□ 2.12
Crlf2Q8CII9 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC28.31■■■□□ 2.12
Crlf2Q8CII9 Gm7432-201ENSMUST00000210343 879 ntBASIC28.3■■■□□ 2.12
Crlf2Q8CII9 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC28.28■■■□□ 2.12
Crlf2Q8CII9 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
Crlf2Q8CII9 Mir6538-201ENSMUST00000183713 110 ntBASIC28.26■■■□□ 2.11
Crlf2Q8CII9 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
Crlf2Q8CII9 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
Crlf2Q8CII9 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC28.25■■■□□ 2.11
Crlf2Q8CII9 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
Crlf2Q8CII9 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC28.24■■■□□ 2.11
Crlf2Q8CII9 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC28.24■■■□□ 2.11
Crlf2Q8CII9 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
Crlf2Q8CII9 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC28.23■■■□□ 2.11
Crlf2Q8CII9 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC28.21■■■□□ 2.11
Crlf2Q8CII9 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC28.19■■■□□ 2.1
Crlf2Q8CII9 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC28.19■■■□□ 2.1
Crlf2Q8CII9 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC28.19■■■□□ 2.1
Crlf2Q8CII9 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC28.18■■■□□ 2.1
Crlf2Q8CII9 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
Crlf2Q8CII9 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
Crlf2Q8CII9 Cap2-205ENSMUST00000225824 1634 ntBASIC28.15■■■□□ 2.1
Crlf2Q8CII9 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC28.15■■■□□ 2.1
Crlf2Q8CII9 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
Crlf2Q8CII9 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
Crlf2Q8CII9 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
Crlf2Q8CII9 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC28.12■■■□□ 2.09
Crlf2Q8CII9 Gm11175-201ENSMUST00000116172 543 ntBASIC28.11■■■□□ 2.09
Crlf2Q8CII9 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
Crlf2Q8CII9 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC28.09■■■□□ 2.09
Crlf2Q8CII9 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC28.08■■■□□ 2.09
Crlf2Q8CII9 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC28.08■■■□□ 2.09
Crlf2Q8CII9 Nkain2-201ENSMUST00000092602 558 ntBASIC28.08■■■□□ 2.09
Crlf2Q8CII9 AC157572.2-201ENSMUST00000226970 908 ntBASIC28.07■■■□□ 2.08
Crlf2Q8CII9 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
Crlf2Q8CII9 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC28.06■■■□□ 2.08
Crlf2Q8CII9 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC28.04■■■□□ 2.08
Crlf2Q8CII9 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC28.04■■■□□ 2.08
Crlf2Q8CII9 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
Crlf2Q8CII9 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
Crlf2Q8CII9 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
Crlf2Q8CII9 Gm11599-201ENSMUST00000118720 878 ntBASIC28.03■■■□□ 2.08
Crlf2Q8CII9 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
Crlf2Q8CII9 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
Crlf2Q8CII9 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC28.02■■■□□ 2.08
Crlf2Q8CII9 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC28.01■■■□□ 2.07
Crlf2Q8CII9 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC27.99■■■□□ 2.07
Crlf2Q8CII9 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC27.97■■■□□ 2.07
Crlf2Q8CII9 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
Crlf2Q8CII9 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC27.96■■■□□ 2.07
Crlf2Q8CII9 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
Crlf2Q8CII9 Gm15039-201ENSMUST00000118914 875 ntBASIC27.94■■■□□ 2.06
Crlf2Q8CII9 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC27.94■■■□□ 2.06
Crlf2Q8CII9 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC27.94■■■□□ 2.06
Crlf2Q8CII9 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC27.93■■■□□ 2.06
Crlf2Q8CII9 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC27.93■■■□□ 2.06
Crlf2Q8CII9 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC27.91■■■□□ 2.06
Crlf2Q8CII9 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC27.91■■■□□ 2.06
Crlf2Q8CII9 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC27.89■■■□□ 2.06
Crlf2Q8CII9 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC27.88■■■□□ 2.05
Crlf2Q8CII9 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC27.87■■■□□ 2.05
Crlf2Q8CII9 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC27.86■■■□□ 2.05
Crlf2Q8CII9 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC27.85■■■□□ 2.05
Crlf2Q8CII9 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
Crlf2Q8CII9 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC27.81■■■□□ 2.04
Crlf2Q8CII9 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC27.8■■■□□ 2.04
Crlf2Q8CII9 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC27.8■■■□□ 2.04
Crlf2Q8CII9 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
Crlf2Q8CII9 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC27.76■■■□□ 2.03
Crlf2Q8CII9 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC27.76■■■□□ 2.03
Crlf2Q8CII9 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC27.76■■■□□ 2.03
Crlf2Q8CII9 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC27.75■■■□□ 2.03
Crlf2Q8CII9 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC27.75■■■□□ 2.03
Crlf2Q8CII9 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
Crlf2Q8CII9 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC27.7■■■□□ 2.03
Crlf2Q8CII9 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC27.7■■■□□ 2.02
Crlf2Q8CII9 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC27.7■■■□□ 2.02
Crlf2Q8CII9 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC27.67■■■□□ 2.02
Crlf2Q8CII9 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC27.67■■■□□ 2.02
Crlf2Q8CII9 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC27.66■■■□□ 2.02
Crlf2Q8CII9 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC27.65■■■□□ 2.02
Crlf2Q8CII9 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC27.65■■■□□ 2.02
Retrieved 100 of 76,532 protein–RNA pairs in 142.6 ms