Protein–RNA interactions for Protein: Q8CHS8

Vps37a, Vacuolar protein sorting-associated protein 37A, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps37aQ8CHS8 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC24.44■■□□□ 1.5
Vps37aQ8CHS8 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC24.43■■□□□ 1.5
Vps37aQ8CHS8 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
Vps37aQ8CHS8 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
Vps37aQ8CHS8 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Vps37aQ8CHS8 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Vps37aQ8CHS8 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC24.41■■□□□ 1.5
Vps37aQ8CHS8 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Vps37aQ8CHS8 Peli2-204ENSMUST00000226513 1320 ntBASIC24.4■■□□□ 1.5
Vps37aQ8CHS8 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC24.4■■□□□ 1.5
Vps37aQ8CHS8 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC24.39■■□□□ 1.49
Vps37aQ8CHS8 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
Vps37aQ8CHS8 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC24.38■■□□□ 1.49
Vps37aQ8CHS8 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC24.38■■□□□ 1.49
Vps37aQ8CHS8 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC24.37■■□□□ 1.49
Vps37aQ8CHS8 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
Vps37aQ8CHS8 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Vps37aQ8CHS8 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Vps37aQ8CHS8 Zxda-201ENSMUST00000117281 2621 ntBASIC24.34■■□□□ 1.49
Vps37aQ8CHS8 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC24.34■■□□□ 1.49
Vps37aQ8CHS8 Gm9905-201ENSMUST00000065740 1845 ntBASIC24.33■■□□□ 1.49
Vps37aQ8CHS8 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC24.32■■□□□ 1.48
Vps37aQ8CHS8 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Vps37aQ8CHS8 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Vps37aQ8CHS8 Gm6345-201ENSMUST00000180378 1691 ntBASIC24.3■■□□□ 1.48
Vps37aQ8CHS8 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Vps37aQ8CHS8 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Vps37aQ8CHS8 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Vps37aQ8CHS8 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Vps37aQ8CHS8 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC24.28■■□□□ 1.48
Vps37aQ8CHS8 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
Vps37aQ8CHS8 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Vps37aQ8CHS8 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC24.27■■□□□ 1.48
Vps37aQ8CHS8 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Vps37aQ8CHS8 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC24.26■■□□□ 1.47
Vps37aQ8CHS8 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC24.24■■□□□ 1.47
Vps37aQ8CHS8 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC24.24■■□□□ 1.47
Vps37aQ8CHS8 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC24.24■■□□□ 1.47
Vps37aQ8CHS8 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
Vps37aQ8CHS8 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC24.22■■□□□ 1.47
Vps37aQ8CHS8 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC24.21■■□□□ 1.47
Vps37aQ8CHS8 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC24.21■■□□□ 1.47
Vps37aQ8CHS8 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC24.21■■□□□ 1.47
Vps37aQ8CHS8 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Vps37aQ8CHS8 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC24.19■■□□□ 1.46
Vps37aQ8CHS8 Gm6206-201ENSMUST00000133472 2199 ntBASIC24.18■■□□□ 1.46
Vps37aQ8CHS8 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC24.18■■□□□ 1.46
Vps37aQ8CHS8 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
Vps37aQ8CHS8 Gm30346-201ENSMUST00000218641 1699 ntBASIC24.17■■□□□ 1.46
Vps37aQ8CHS8 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC24.17■■□□□ 1.46
Vps37aQ8CHS8 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC24.16■■□□□ 1.46
Vps37aQ8CHS8 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
Vps37aQ8CHS8 Gm43445-201ENSMUST00000198564 2091 ntBASIC24.16■■□□□ 1.46
Vps37aQ8CHS8 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC24.16■■□□□ 1.46
Vps37aQ8CHS8 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC24.15■■□□□ 1.46
Vps37aQ8CHS8 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Vps37aQ8CHS8 Gm24804-201ENSMUST00000174982 85 ntBASIC24.14■■□□□ 1.45
Vps37aQ8CHS8 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Vps37aQ8CHS8 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Vps37aQ8CHS8 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
Vps37aQ8CHS8 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Vps37aQ8CHS8 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC24.12■■□□□ 1.45
Vps37aQ8CHS8 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Vps37aQ8CHS8 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Vps37aQ8CHS8 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
Vps37aQ8CHS8 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Vps37aQ8CHS8 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Vps37aQ8CHS8 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
Vps37aQ8CHS8 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
Vps37aQ8CHS8 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
Vps37aQ8CHS8 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Vps37aQ8CHS8 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Vps37aQ8CHS8 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
Vps37aQ8CHS8 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC24.04■■□□□ 1.44
Vps37aQ8CHS8 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Vps37aQ8CHS8 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC24.03■■□□□ 1.44
Vps37aQ8CHS8 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Vps37aQ8CHS8 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC24.03■■□□□ 1.44
Vps37aQ8CHS8 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Vps37aQ8CHS8 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Vps37aQ8CHS8 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Vps37aQ8CHS8 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
Vps37aQ8CHS8 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC24■■□□□ 1.43
Vps37aQ8CHS8 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC24■■□□□ 1.43
Vps37aQ8CHS8 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
Vps37aQ8CHS8 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
Vps37aQ8CHS8 Gm16148-201ENSMUST00000119653 893 ntBASIC23.98■■□□□ 1.43
Vps37aQ8CHS8 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC23.97■■□□□ 1.43
Vps37aQ8CHS8 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
Vps37aQ8CHS8 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Vps37aQ8CHS8 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC23.94■■□□□ 1.42
Vps37aQ8CHS8 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
Vps37aQ8CHS8 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
Vps37aQ8CHS8 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC23.91■■□□□ 1.42
Vps37aQ8CHS8 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Vps37aQ8CHS8 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC23.9■■□□□ 1.42
Vps37aQ8CHS8 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
Vps37aQ8CHS8 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC23.89■■□□□ 1.42
Vps37aQ8CHS8 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.42
Vps37aQ8CHS8 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms