Protein–RNA interactions for Protein: Q8C2E4

Ptcd1, Pentatricopeptide repeat-containing protein 1, mitochondrial, mousemouse

Known RBP Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd1Q8C2E4 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC31,89■■■□□ 2,7
Ptcd1Q8C2E4 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC31,88■■■□□ 2,69
Ptcd1Q8C2E4 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC31,87■■■□□ 2,69
Ptcd1Q8C2E4 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC31,87■■■□□ 2,69
Ptcd1Q8C2E4 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC31,87■■■□□ 2,69
Ptcd1Q8C2E4 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC31,86■■■□□ 2,69
Ptcd1Q8C2E4 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC31,86■■■□□ 2,69
Ptcd1Q8C2E4 Gm8503-201ENSMUST00000118131 455 ntBASIC31,85■■■□□ 2,69
Ptcd1Q8C2E4 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC31,85■■■□□ 2,69
Ptcd1Q8C2E4 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC31,84■■■□□ 2,69
Ptcd1Q8C2E4 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC31,84■■■□□ 2,69
Ptcd1Q8C2E4 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC31,84■■■□□ 2,69
Ptcd1Q8C2E4 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC31,83■■■□□ 2,69
Ptcd1Q8C2E4 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC31,8■■■□□ 2,68
Ptcd1Q8C2E4 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC31,79■■■□□ 2,68
Ptcd1Q8C2E4 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC31,78■■■□□ 2,68
Ptcd1Q8C2E4 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC31,76■■■□□ 2,67
Ptcd1Q8C2E4 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC31,75■■■□□ 2,67
Ptcd1Q8C2E4 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC31,74■■■□□ 2,67
Ptcd1Q8C2E4 Gm6821-201ENSMUST00000107540 542 ntBASIC31,73■■■□□ 2,67
Ptcd1Q8C2E4 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC31,73■■■□□ 2,67
Ptcd1Q8C2E4 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC31,73■■■□□ 2,67
Ptcd1Q8C2E4 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC31,72■■■□□ 2,67
Ptcd1Q8C2E4 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC31,68■■■□□ 2,66
Ptcd1Q8C2E4 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC31,67■■■□□ 2,66
Ptcd1Q8C2E4 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC31,64■■■□□ 2,66
Ptcd1Q8C2E4 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC31,64■■■□□ 2,66
Ptcd1Q8C2E4 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC31,61■■■□□ 2,65
Ptcd1Q8C2E4 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC31,61■■■□□ 2,65
Ptcd1Q8C2E4 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC31,6■■■□□ 2,65
Ptcd1Q8C2E4 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC31,59■■■□□ 2,65
Ptcd1Q8C2E4 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC31,58■■■□□ 2,65
Ptcd1Q8C2E4 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC31,56■■■□□ 2,64
Ptcd1Q8C2E4 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC31,55■■■□□ 2,64
Ptcd1Q8C2E4 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC31,55■■■□□ 2,64
Ptcd1Q8C2E4 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC31,54■■■□□ 2,64
Ptcd1Q8C2E4 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC31,53■■■□□ 2,64
Ptcd1Q8C2E4 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC31,52■■■□□ 2,64
Ptcd1Q8C2E4 Gm43863-201ENSMUST00000203822 1192 ntBASIC31,52■■■□□ 2,64
Ptcd1Q8C2E4 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC31,52■■■□□ 2,64
Ptcd1Q8C2E4 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC31,5■■■□□ 2,63
Ptcd1Q8C2E4 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC31,48■■■□□ 2,63
Ptcd1Q8C2E4 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC31,47■■■□□ 2,63
Ptcd1Q8C2E4 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC31,47■■■□□ 2,63
Ptcd1Q8C2E4 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC31,47■■■□□ 2,63
Ptcd1Q8C2E4 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC31,46■■■□□ 2,63
Ptcd1Q8C2E4 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC31,44■■■□□ 2,62
Ptcd1Q8C2E4 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC31,41■■■□□ 2,62
Ptcd1Q8C2E4 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC31,4■■■□□ 2,62
Ptcd1Q8C2E4 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC31,4■■■□□ 2,62
Ptcd1Q8C2E4 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC31,38■■■□□ 2,61
Ptcd1Q8C2E4 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC31,37■■■□□ 2,61
Ptcd1Q8C2E4 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC31,37■■■□□ 2,61
Ptcd1Q8C2E4 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC31,36■■■□□ 2,61
Ptcd1Q8C2E4 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC31,35■■■□□ 2,61
Ptcd1Q8C2E4 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC31,35■■■□□ 2,61
Ptcd1Q8C2E4 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC31,34■■■□□ 2,61
Ptcd1Q8C2E4 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC31,34■■■□□ 2,61
Ptcd1Q8C2E4 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC31,34■■■□□ 2,61
Ptcd1Q8C2E4 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC31,32■■■□□ 2,6
Ptcd1Q8C2E4 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC31,31■■■□□ 2,6
Ptcd1Q8C2E4 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC31,29■■■□□ 2,6
Ptcd1Q8C2E4 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC31,27■■■□□ 2,6
Ptcd1Q8C2E4 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC31,27■■■□□ 2,6
Ptcd1Q8C2E4 Gm2415-204ENSMUST00000190235 2004 ntBASIC31,25■■■□□ 2,59
Ptcd1Q8C2E4 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC31,24■■■□□ 2,59
Ptcd1Q8C2E4 Gm42809-201ENSMUST00000198429 1138 ntBASIC31,23■■■□□ 2,59
Ptcd1Q8C2E4 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC31,23■■■□□ 2,59
Ptcd1Q8C2E4 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC31,22■■■□□ 2,59
Ptcd1Q8C2E4 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC31,22■■■□□ 2,59
Ptcd1Q8C2E4 AC157572.2-201ENSMUST00000226970 908 ntBASIC31,22■■■□□ 2,59
Ptcd1Q8C2E4 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC31,2■■■□□ 2,59
Ptcd1Q8C2E4 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC31,19■■■□□ 2,58
Ptcd1Q8C2E4 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC31,17■■■□□ 2,58
Ptcd1Q8C2E4 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC31,15■■■□□ 2,58
Ptcd1Q8C2E4 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC31,15■■■□□ 2,58
Ptcd1Q8C2E4 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC31,14■■■□□ 2,58
Ptcd1Q8C2E4 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC31,14■■■□□ 2,58
Ptcd1Q8C2E4 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC31,14■■■□□ 2,57
Ptcd1Q8C2E4 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC31,13■■■□□ 2,57
Ptcd1Q8C2E4 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC31,12■■■□□ 2,57
Ptcd1Q8C2E4 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC31,12■■■□□ 2,57
Ptcd1Q8C2E4 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC31,12■■■□□ 2,57
Ptcd1Q8C2E4 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC31,11■■■□□ 2,57
Ptcd1Q8C2E4 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC31,1■■■□□ 2,57
Ptcd1Q8C2E4 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC31,1■■■□□ 2,57
Ptcd1Q8C2E4 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC31,1■■■□□ 2,57
Ptcd1Q8C2E4 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC31,1■■■□□ 2,57
Ptcd1Q8C2E4 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC31,08■■■□□ 2,57
Ptcd1Q8C2E4 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC31,08■■■□□ 2,57
Ptcd1Q8C2E4 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC31,08■■■□□ 2,57
Ptcd1Q8C2E4 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC31,08■■■□□ 2,57
Ptcd1Q8C2E4 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC31,07■■■□□ 2,56
Ptcd1Q8C2E4 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC31,06■■■□□ 2,56
Ptcd1Q8C2E4 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC31,06■■■□□ 2,56
Ptcd1Q8C2E4 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC31,05■■■□□ 2,56
Ptcd1Q8C2E4 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC31,05■■■□□ 2,56
Ptcd1Q8C2E4 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC31,05■■■□□ 2,56
Ptcd1Q8C2E4 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC31,04■■■□□ 2,56
Ptcd1Q8C2E4 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC31,02■■■□□ 2,56
Retrieved 100 of 76,532 protein–RNA pairs in 22,3 ms