Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
Trub1Q8C0D0 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Trub1Q8C0D0 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Trub1Q8C0D0 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
Trub1Q8C0D0 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC26.35■■□□□ 1.81
Trub1Q8C0D0 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Trub1Q8C0D0 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC26.33■■□□□ 1.81
Trub1Q8C0D0 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Trub1Q8C0D0 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Trub1Q8C0D0 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
Trub1Q8C0D0 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Trub1Q8C0D0 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC26.29■■□□□ 1.8
Trub1Q8C0D0 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC26.28■■□□□ 1.8
Trub1Q8C0D0 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Trub1Q8C0D0 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Trub1Q8C0D0 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
Trub1Q8C0D0 Gm30346-201ENSMUST00000218641 1699 ntBASIC26.26■■□□□ 1.79
Trub1Q8C0D0 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
Trub1Q8C0D0 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC26.25■■□□□ 1.79
Trub1Q8C0D0 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC26.25■■□□□ 1.79
Trub1Q8C0D0 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Trub1Q8C0D0 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC26.24■■□□□ 1.79
Trub1Q8C0D0 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
Trub1Q8C0D0 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC26.23■■□□□ 1.79
Trub1Q8C0D0 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
Trub1Q8C0D0 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC26.23■■□□□ 1.79
Trub1Q8C0D0 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC26.22■■□□□ 1.79
Trub1Q8C0D0 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC26.22■■□□□ 1.79
Trub1Q8C0D0 Zxda-201ENSMUST00000117281 2621 ntBASIC26.21■■□□□ 1.79
Trub1Q8C0D0 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC26.21■■□□□ 1.79
Trub1Q8C0D0 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
Trub1Q8C0D0 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC26.21■■□□□ 1.79
Trub1Q8C0D0 Gm6345-201ENSMUST00000180378 1691 ntBASIC26.21■■□□□ 1.79
Trub1Q8C0D0 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC26.19■■□□□ 1.78
Trub1Q8C0D0 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC26.17■■□□□ 1.78
Trub1Q8C0D0 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Trub1Q8C0D0 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Trub1Q8C0D0 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Trub1Q8C0D0 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
Trub1Q8C0D0 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
Trub1Q8C0D0 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC26.14■■□□□ 1.78
Trub1Q8C0D0 Gm16148-201ENSMUST00000119653 893 ntBASIC26.13■■□□□ 1.77
Trub1Q8C0D0 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Trub1Q8C0D0 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Trub1Q8C0D0 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC26.11■■□□□ 1.77
Trub1Q8C0D0 Gm6206-201ENSMUST00000133472 2199 ntBASIC26.11■■□□□ 1.77
Trub1Q8C0D0 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
Trub1Q8C0D0 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC26.1■■□□□ 1.77
Trub1Q8C0D0 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
Trub1Q8C0D0 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Trub1Q8C0D0 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
Trub1Q8C0D0 Gm9905-201ENSMUST00000065740 1845 ntBASIC26.09■■□□□ 1.77
Trub1Q8C0D0 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC26.08■■□□□ 1.77
Trub1Q8C0D0 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.76
Trub1Q8C0D0 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC26.07■■□□□ 1.76
Trub1Q8C0D0 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Trub1Q8C0D0 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC26.06■■□□□ 1.76
Trub1Q8C0D0 Gm43445-201ENSMUST00000198564 2091 ntBASIC26.04■■□□□ 1.76
Trub1Q8C0D0 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Trub1Q8C0D0 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC26■■□□□ 1.75
Trub1Q8C0D0 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
Trub1Q8C0D0 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC25.98■■□□□ 1.75
Trub1Q8C0D0 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
Trub1Q8C0D0 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
Trub1Q8C0D0 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC25.97■■□□□ 1.75
Trub1Q8C0D0 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
Trub1Q8C0D0 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC25.96■■□□□ 1.75
Trub1Q8C0D0 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC25.95■■□□□ 1.75
Trub1Q8C0D0 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
Trub1Q8C0D0 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC25.93■■□□□ 1.74
Trub1Q8C0D0 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
Trub1Q8C0D0 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC25.93■■□□□ 1.74
Trub1Q8C0D0 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
Trub1Q8C0D0 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
Trub1Q8C0D0 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC25.91■■□□□ 1.74
Trub1Q8C0D0 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
Trub1Q8C0D0 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
Trub1Q8C0D0 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
Trub1Q8C0D0 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Trub1Q8C0D0 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
Trub1Q8C0D0 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Trub1Q8C0D0 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
Trub1Q8C0D0 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC25.87■■□□□ 1.73
Trub1Q8C0D0 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
Trub1Q8C0D0 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
Trub1Q8C0D0 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC25.85■■□□□ 1.73
Trub1Q8C0D0 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC25.85■■□□□ 1.73
Trub1Q8C0D0 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC25.85■■□□□ 1.73
Trub1Q8C0D0 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
Trub1Q8C0D0 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC25.84■■□□□ 1.73
Trub1Q8C0D0 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
Trub1Q8C0D0 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Trub1Q8C0D0 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC25.81■■□□□ 1.72
Trub1Q8C0D0 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
Trub1Q8C0D0 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
Trub1Q8C0D0 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
Trub1Q8C0D0 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
Trub1Q8C0D0 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
Trub1Q8C0D0 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC25.78■■□□□ 1.72
Trub1Q8C0D0 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms