Protein–RNA interactions for Protein: Q8BX39

Cphx2, Cytoplasmic polyadenylated homeobox, mousemouse

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cphx2Q8BX39 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cphx2Q8BX39 Mipep-204ENSMUST00000225043 1548 ntBASIC18.9■□□□□ 0.62
Cphx2Q8BX39 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cphx2Q8BX39 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Cphx2Q8BX39 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Cphx2Q8BX39 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cphx2Q8BX39 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Cphx2Q8BX39 AL845457.1-201ENSMUST00000197244 68 ntBASIC18.85■□□□□ 0.61
Cphx2Q8BX39 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC18.85■□□□□ 0.61
Cphx2Q8BX39 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cphx2Q8BX39 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cphx2Q8BX39 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cphx2Q8BX39 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cphx2Q8BX39 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cphx2Q8BX39 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Cphx2Q8BX39 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Cphx2Q8BX39 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Cphx2Q8BX39 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cphx2Q8BX39 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cphx2Q8BX39 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cphx2Q8BX39 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cphx2Q8BX39 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cphx2Q8BX39 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cphx2Q8BX39 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cphx2Q8BX39 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cphx2Q8BX39 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cphx2Q8BX39 Gm26115-201ENSMUST00000175605 87 ntBASIC18.78■□□□□ 0.6
Cphx2Q8BX39 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cphx2Q8BX39 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Cphx2Q8BX39 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC18.77■□□□□ 0.6
Cphx2Q8BX39 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Cphx2Q8BX39 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Cphx2Q8BX39 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Cphx2Q8BX39 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cphx2Q8BX39 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Cphx2Q8BX39 Gm17082-201ENSMUST00000166043 1091 ntBASIC18.76■□□□□ 0.59
Cphx2Q8BX39 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Cphx2Q8BX39 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cphx2Q8BX39 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cphx2Q8BX39 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cphx2Q8BX39 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
Cphx2Q8BX39 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cphx2Q8BX39 Gm27322-201ENSMUST00000184007 104 ntBASIC18.75■□□□□ 0.59
Cphx2Q8BX39 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Cphx2Q8BX39 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cphx2Q8BX39 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cphx2Q8BX39 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cphx2Q8BX39 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cphx2Q8BX39 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cphx2Q8BX39 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cphx2Q8BX39 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cphx2Q8BX39 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cphx2Q8BX39 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Cphx2Q8BX39 Gm8109-201ENSMUST00000194076 746 ntBASIC18.71■□□□□ 0.59
Cphx2Q8BX39 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC18.71■□□□□ 0.59
Cphx2Q8BX39 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Cphx2Q8BX39 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
Cphx2Q8BX39 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Cphx2Q8BX39 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cphx2Q8BX39 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Cphx2Q8BX39 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cphx2Q8BX39 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Cphx2Q8BX39 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Cphx2Q8BX39 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cphx2Q8BX39 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC18.67■□□□□ 0.58
Cphx2Q8BX39 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cphx2Q8BX39 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Cphx2Q8BX39 Gm20634-201ENSMUST00000090779 2956 ntBASIC18.66■□□□□ 0.58
Cphx2Q8BX39 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cphx2Q8BX39 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cphx2Q8BX39 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cphx2Q8BX39 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Cphx2Q8BX39 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Cphx2Q8BX39 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cphx2Q8BX39 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cphx2Q8BX39 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Cphx2Q8BX39 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cphx2Q8BX39 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cphx2Q8BX39 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cphx2Q8BX39 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cphx2Q8BX39 Gm43445-201ENSMUST00000198564 2091 ntBASIC18.61■□□□□ 0.57
Cphx2Q8BX39 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Cphx2Q8BX39 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Cphx2Q8BX39 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cphx2Q8BX39 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cphx2Q8BX39 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cphx2Q8BX39 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cphx2Q8BX39 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cphx2Q8BX39 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC18.54■□□□□ 0.56
Cphx2Q8BX39 AC166822.3-201ENSMUST00000227394 661 ntBASIC18.54■□□□□ 0.56
Cphx2Q8BX39 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cphx2Q8BX39 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cphx2Q8BX39 AC153890.1-201ENSMUST00000220021 2469 ntBASIC18.52■□□□□ 0.56
Cphx2Q8BX39 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Cphx2Q8BX39 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Cphx2Q8BX39 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cphx2Q8BX39 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Cphx2Q8BX39 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Cphx2Q8BX39 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Cphx2Q8BX39 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 8.1 ms