Protein–RNA interactions for Protein: Q8BRJ4

Ppp1r3e, Protein phosphatase 1 regulatory subunit 3E, mousemouse

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ppp1r3eQ8BRJ4 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
Ppp1r3eQ8BRJ4 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC23.87■■□□□ 1.41
Ppp1r3eQ8BRJ4 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC23.86■■□□□ 1.41
Ppp1r3eQ8BRJ4 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
Ppp1r3eQ8BRJ4 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Ppp1r3eQ8BRJ4 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Ppp1r3eQ8BRJ4 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC23.82■■□□□ 1.4
Ppp1r3eQ8BRJ4 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Ppp1r3eQ8BRJ4 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Ppp1r3eQ8BRJ4 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Ppp1r3eQ8BRJ4 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Ppp1r3eQ8BRJ4 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC23.79■■□□□ 1.4
Ppp1r3eQ8BRJ4 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Ppp1r3eQ8BRJ4 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
Ppp1r3eQ8BRJ4 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Ppp1r3eQ8BRJ4 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
Ppp1r3eQ8BRJ4 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Ppp1r3eQ8BRJ4 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
Ppp1r3eQ8BRJ4 Fezf2-202ENSMUST00000224023 1917 ntBASIC23.75■■□□□ 1.39
Ppp1r3eQ8BRJ4 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC23.75■■□□□ 1.39
Ppp1r3eQ8BRJ4 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC23.74■■□□□ 1.39
Ppp1r3eQ8BRJ4 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Ppp1r3eQ8BRJ4 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Ppp1r3eQ8BRJ4 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC23.72■■□□□ 1.39
Ppp1r3eQ8BRJ4 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
Ppp1r3eQ8BRJ4 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Ppp1r3eQ8BRJ4 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Ppp1r3eQ8BRJ4 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC23.7■■□□□ 1.38
Ppp1r3eQ8BRJ4 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Ppp1r3eQ8BRJ4 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC23.69■■□□□ 1.38
Ppp1r3eQ8BRJ4 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC23.68■■□□□ 1.38
Ppp1r3eQ8BRJ4 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Ppp1r3eQ8BRJ4 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Ppp1r3eQ8BRJ4 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Ppp1r3eQ8BRJ4 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC23.66■■□□□ 1.38
Ppp1r3eQ8BRJ4 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC23.66■■□□□ 1.38
Ppp1r3eQ8BRJ4 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC23.66■■□□□ 1.38
Ppp1r3eQ8BRJ4 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Ppp1r3eQ8BRJ4 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
Ppp1r3eQ8BRJ4 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Ppp1r3eQ8BRJ4 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Ppp1r3eQ8BRJ4 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC23.64■■□□□ 1.38
Ppp1r3eQ8BRJ4 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC23.63■■□□□ 1.37
Ppp1r3eQ8BRJ4 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
Ppp1r3eQ8BRJ4 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
Ppp1r3eQ8BRJ4 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC23.6■■□□□ 1.37
Ppp1r3eQ8BRJ4 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC23.59■■□□□ 1.37
Ppp1r3eQ8BRJ4 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Ppp1r3eQ8BRJ4 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Ppp1r3eQ8BRJ4 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC23.59■■□□□ 1.37
Ppp1r3eQ8BRJ4 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC23.59■■□□□ 1.37
Ppp1r3eQ8BRJ4 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Ppp1r3eQ8BRJ4 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
Ppp1r3eQ8BRJ4 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Ppp1r3eQ8BRJ4 Gm30346-201ENSMUST00000218641 1699 ntBASIC23.57■■□□□ 1.36
Ppp1r3eQ8BRJ4 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Ppp1r3eQ8BRJ4 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Ppp1r3eQ8BRJ4 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Ppp1r3eQ8BRJ4 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Ppp1r3eQ8BRJ4 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Ppp1r3eQ8BRJ4 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC23.55■■□□□ 1.36
Ppp1r3eQ8BRJ4 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
Ppp1r3eQ8BRJ4 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
Ppp1r3eQ8BRJ4 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Ppp1r3eQ8BRJ4 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Ppp1r3eQ8BRJ4 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC23.55■■□□□ 1.36
Ppp1r3eQ8BRJ4 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Ppp1r3eQ8BRJ4 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC23.54■■□□□ 1.36
Ppp1r3eQ8BRJ4 AC166822.3-201ENSMUST00000227394 661 ntBASIC23.54■■□□□ 1.36
Ppp1r3eQ8BRJ4 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Ppp1r3eQ8BRJ4 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Ppp1r3eQ8BRJ4 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Ppp1r3eQ8BRJ4 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Ppp1r3eQ8BRJ4 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Ppp1r3eQ8BRJ4 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC23.5■■□□□ 1.35
Ppp1r3eQ8BRJ4 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Ppp1r3eQ8BRJ4 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
Ppp1r3eQ8BRJ4 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Ppp1r3eQ8BRJ4 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC23.46■■□□□ 1.35
Ppp1r3eQ8BRJ4 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
Ppp1r3eQ8BRJ4 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Ppp1r3eQ8BRJ4 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC23.45■■□□□ 1.34
Ppp1r3eQ8BRJ4 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Ppp1r3eQ8BRJ4 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC23.43■■□□□ 1.34
Ppp1r3eQ8BRJ4 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC23.43■■□□□ 1.34
Ppp1r3eQ8BRJ4 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
Ppp1r3eQ8BRJ4 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Ppp1r3eQ8BRJ4 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
Ppp1r3eQ8BRJ4 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Ppp1r3eQ8BRJ4 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC23.41■■□□□ 1.34
Ppp1r3eQ8BRJ4 Gm17082-201ENSMUST00000166043 1091 ntBASIC23.4■■□□□ 1.34
Ppp1r3eQ8BRJ4 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Ppp1r3eQ8BRJ4 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Ppp1r3eQ8BRJ4 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Ppp1r3eQ8BRJ4 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC23.37■■□□□ 1.33
Ppp1r3eQ8BRJ4 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Ppp1r3eQ8BRJ4 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Ppp1r3eQ8BRJ4 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
Ppp1r3eQ8BRJ4 Gm27322-201ENSMUST00000184007 104 ntBASIC23.35■■□□□ 1.33
Ppp1r3eQ8BRJ4 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
Retrieved 100 of 76,532 protein–RNA pairs in 65.3 ms