Protein–RNA interactions for Protein: Q8BHD0

Rab39a, Ras-related protein Rab-39A, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab39aQ8BHD0 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
Rab39aQ8BHD0 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC23.07■■□□□ 1.28
Rab39aQ8BHD0 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC23.06■■□□□ 1.28
Rab39aQ8BHD0 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Rab39aQ8BHD0 Mipep-204ENSMUST00000225043 1548 ntBASIC23.05■■□□□ 1.28
Rab39aQ8BHD0 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
Rab39aQ8BHD0 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
Rab39aQ8BHD0 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC23.04■■□□□ 1.28
Rab39aQ8BHD0 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC23.04■■□□□ 1.28
Rab39aQ8BHD0 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC23.04■■□□□ 1.28
Rab39aQ8BHD0 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC23.02■■□□□ 1.28
Rab39aQ8BHD0 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC23■■□□□ 1.27
Rab39aQ8BHD0 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC23■■□□□ 1.27
Rab39aQ8BHD0 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Rab39aQ8BHD0 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Rab39aQ8BHD0 Fezf2-202ENSMUST00000224023 1917 ntBASIC23■■□□□ 1.27
Rab39aQ8BHD0 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Rab39aQ8BHD0 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Rab39aQ8BHD0 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Rab39aQ8BHD0 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC22.98■■□□□ 1.27
Rab39aQ8BHD0 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC22.98■■□□□ 1.27
Rab39aQ8BHD0 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Rab39aQ8BHD0 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
Rab39aQ8BHD0 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Rab39aQ8BHD0 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Rab39aQ8BHD0 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
Rab39aQ8BHD0 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Rab39aQ8BHD0 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Rab39aQ8BHD0 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC22.94■■□□□ 1.26
Rab39aQ8BHD0 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Rab39aQ8BHD0 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Rab39aQ8BHD0 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC22.94■■□□□ 1.26
Rab39aQ8BHD0 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Rab39aQ8BHD0 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC22.93■■□□□ 1.26
Rab39aQ8BHD0 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
Rab39aQ8BHD0 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Rab39aQ8BHD0 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
Rab39aQ8BHD0 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
Rab39aQ8BHD0 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Rab39aQ8BHD0 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC22.88■■□□□ 1.25
Rab39aQ8BHD0 AC153890.1-201ENSMUST00000220021 2469 ntBASIC22.87■■□□□ 1.25
Rab39aQ8BHD0 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Rab39aQ8BHD0 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Rab39aQ8BHD0 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Rab39aQ8BHD0 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Rab39aQ8BHD0 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Rab39aQ8BHD0 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Rab39aQ8BHD0 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC22.83■■□□□ 1.25
Rab39aQ8BHD0 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
Rab39aQ8BHD0 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC22.83■■□□□ 1.25
Rab39aQ8BHD0 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Rab39aQ8BHD0 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
Rab39aQ8BHD0 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
Rab39aQ8BHD0 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Rab39aQ8BHD0 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC22.79■■□□□ 1.24
Rab39aQ8BHD0 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
Rab39aQ8BHD0 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Rab39aQ8BHD0 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
Rab39aQ8BHD0 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Rab39aQ8BHD0 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
Rab39aQ8BHD0 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC22.75■■□□□ 1.23
Rab39aQ8BHD0 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC22.75■■□□□ 1.23
Rab39aQ8BHD0 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC22.74■■□□□ 1.23
Rab39aQ8BHD0 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Rab39aQ8BHD0 Gm24804-201ENSMUST00000174982 85 ntBASIC22.73■■□□□ 1.23
Rab39aQ8BHD0 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Rab39aQ8BHD0 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC22.7■■□□□ 1.23
Rab39aQ8BHD0 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC22.7■■□□□ 1.23
Rab39aQ8BHD0 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
Rab39aQ8BHD0 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC22.7■■□□□ 1.22
Rab39aQ8BHD0 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Rab39aQ8BHD0 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC22.68■■□□□ 1.22
Rab39aQ8BHD0 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Rab39aQ8BHD0 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Rab39aQ8BHD0 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Rab39aQ8BHD0 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC22.67■■□□□ 1.22
Rab39aQ8BHD0 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC22.66■■□□□ 1.22
Rab39aQ8BHD0 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
Rab39aQ8BHD0 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Rab39aQ8BHD0 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Rab39aQ8BHD0 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.22
Rab39aQ8BHD0 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
Rab39aQ8BHD0 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
Rab39aQ8BHD0 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
Rab39aQ8BHD0 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Rab39aQ8BHD0 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Rab39aQ8BHD0 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Rab39aQ8BHD0 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Rab39aQ8BHD0 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Rab39aQ8BHD0 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC22.59■■□□□ 1.21
Rab39aQ8BHD0 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Rab39aQ8BHD0 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Rab39aQ8BHD0 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Rab39aQ8BHD0 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Rab39aQ8BHD0 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.21
Rab39aQ8BHD0 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
Rab39aQ8BHD0 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Rab39aQ8BHD0 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Rab39aQ8BHD0 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Rab39aQ8BHD0 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
Retrieved 100 of 76,532 protein–RNA pairs in 104.9 ms