Protein–RNA interactions for Protein: Q80U95

Ube3c, Ubiquitin-protein ligase E3C, mousemouse

Predictions only

Length 1,083 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3cQ80U95 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
Ube3cQ80U95 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
Ube3cQ80U95 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC30.76■■■□□ 2.51
Ube3cQ80U95 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
Ube3cQ80U95 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
Ube3cQ80U95 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
Ube3cQ80U95 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC30.74■■■□□ 2.51
Ube3cQ80U95 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC30.74■■■□□ 2.51
Ube3cQ80U95 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC30.74■■■□□ 2.51
Ube3cQ80U95 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC30.74■■■□□ 2.51
Ube3cQ80U95 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC30.73■■■□□ 2.51
Ube3cQ80U95 Gm6658-202ENSMUST00000209493 1885 ntBASIC30.73■■■□□ 2.51
Ube3cQ80U95 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC30.73■■■□□ 2.51
Ube3cQ80U95 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC30.72■■■□□ 2.51
Ube3cQ80U95 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC30.72■■■□□ 2.51
Ube3cQ80U95 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC30.69■■■□□ 2.5
Ube3cQ80U95 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC30.69■■■□□ 2.5
Ube3cQ80U95 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC30.69■■■□□ 2.5
Ube3cQ80U95 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC30.68■■■□□ 2.5
Ube3cQ80U95 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC30.68■■■□□ 2.5
Ube3cQ80U95 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
Ube3cQ80U95 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC30.68■■■□□ 2.5
Ube3cQ80U95 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
Ube3cQ80U95 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
Ube3cQ80U95 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC30.66■■■□□ 2.5
Ube3cQ80U95 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
Ube3cQ80U95 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC30.64■■■□□ 2.5
Ube3cQ80U95 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
Ube3cQ80U95 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC30.63■■■□□ 2.49
Ube3cQ80U95 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
Ube3cQ80U95 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
Ube3cQ80U95 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC30.62■■■□□ 2.49
Ube3cQ80U95 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC30.61■■■□□ 2.49
Ube3cQ80U95 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC30.6■■■□□ 2.49
Ube3cQ80U95 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC30.6■■■□□ 2.49
Ube3cQ80U95 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC30.57■■■□□ 2.48
Ube3cQ80U95 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC30.56■■■□□ 2.48
Ube3cQ80U95 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
Ube3cQ80U95 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC30.54■■■□□ 2.48
Ube3cQ80U95 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
Ube3cQ80U95 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
Ube3cQ80U95 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
Ube3cQ80U95 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC30.52■■■□□ 2.48
Ube3cQ80U95 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC30.51■■■□□ 2.47
Ube3cQ80U95 Gm24970-201ENSMUST00000175582 82 ntBASIC30.49■■■□□ 2.47
Ube3cQ80U95 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC30.49■■■□□ 2.47
Ube3cQ80U95 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
Ube3cQ80U95 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
Ube3cQ80U95 Gm30346-201ENSMUST00000218641 1699 ntBASIC30.47■■■□□ 2.47
Ube3cQ80U95 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC30.46■■■□□ 2.47
Ube3cQ80U95 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
Ube3cQ80U95 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
Ube3cQ80U95 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC30.43■■■□□ 2.46
Ube3cQ80U95 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
Ube3cQ80U95 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC30.42■■■□□ 2.46
Ube3cQ80U95 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC30.41■■■□□ 2.46
Ube3cQ80U95 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
Ube3cQ80U95 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC30.41■■■□□ 2.46
Ube3cQ80U95 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
Ube3cQ80U95 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC30.4■■■□□ 2.46
Ube3cQ80U95 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
Ube3cQ80U95 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
Ube3cQ80U95 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC30.36■■■□□ 2.45
Ube3cQ80U95 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC30.36■■■□□ 2.45
Ube3cQ80U95 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
Ube3cQ80U95 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC30.34■■■□□ 2.45
Ube3cQ80U95 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
Ube3cQ80U95 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC30.34■■■□□ 2.45
Ube3cQ80U95 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
Ube3cQ80U95 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
Ube3cQ80U95 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC30.33■■■□□ 2.45
Ube3cQ80U95 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC30.33■■■□□ 2.45
Ube3cQ80U95 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
Ube3cQ80U95 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
Ube3cQ80U95 Gm43863-201ENSMUST00000203822 1192 ntBASIC30.3■■■□□ 2.44
Ube3cQ80U95 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
Ube3cQ80U95 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
Ube3cQ80U95 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
Ube3cQ80U95 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC30.26■■■□□ 2.43
Ube3cQ80U95 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC30.26■■■□□ 2.43
Ube3cQ80U95 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
Ube3cQ80U95 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
Ube3cQ80U95 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC30.23■■■□□ 2.43
Ube3cQ80U95 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
Ube3cQ80U95 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
Ube3cQ80U95 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC30.21■■■□□ 2.43
Ube3cQ80U95 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC30.2■■■□□ 2.43
Ube3cQ80U95 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC30.18■■■□□ 2.42
Ube3cQ80U95 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
Ube3cQ80U95 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
Ube3cQ80U95 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC30.17■■■□□ 2.42
Ube3cQ80U95 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC30.16■■■□□ 2.42
Ube3cQ80U95 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC30.16■■■□□ 2.42
Ube3cQ80U95 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC30.14■■■□□ 2.42
Ube3cQ80U95 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC30.13■■■□□ 2.41
Ube3cQ80U95 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC30.13■■■□□ 2.41
Ube3cQ80U95 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC30.13■■■□□ 2.41
Ube3cQ80U95 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
Ube3cQ80U95 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
Ube3cQ80U95 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
Retrieved 100 of 76,532 protein–RNA pairs in 101.4 ms