Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC25,08■■□□□ 1,61
Pcdh19Q80TF3 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC25,08■■□□□ 1,61
Pcdh19Q80TF3 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC25,08■■□□□ 1,61
Pcdh19Q80TF3 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC25,07■■□□□ 1,6
Pcdh19Q80TF3 Gm2415-204ENSMUST00000190235 2004 ntBASIC25,07■■□□□ 1,6
Pcdh19Q80TF3 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC25,06■■□□□ 1,6
Pcdh19Q80TF3 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC25,05■■□□□ 1,6
Pcdh19Q80TF3 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC25,05■■□□□ 1,6
Pcdh19Q80TF3 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC25,05■■□□□ 1,6
Pcdh19Q80TF3 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC25,04■■□□□ 1,6
Pcdh19Q80TF3 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC25,04■■□□□ 1,6
Pcdh19Q80TF3 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC25,03■■□□□ 1,6
Pcdh19Q80TF3 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC25,03■■□□□ 1,6
Pcdh19Q80TF3 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC25,03■■□□□ 1,6
Pcdh19Q80TF3 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC25,02■■□□□ 1,6
Pcdh19Q80TF3 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC25,01■■□□□ 1,59
Pcdh19Q80TF3 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC25,01■■□□□ 1,59
Pcdh19Q80TF3 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC25■■□□□ 1,59
Pcdh19Q80TF3 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC24,99■■□□□ 1,59
Pcdh19Q80TF3 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC24,98■■□□□ 1,59
Pcdh19Q80TF3 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC24,98■■□□□ 1,59
Pcdh19Q80TF3 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC24,97■■□□□ 1,59
Pcdh19Q80TF3 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC24,96■■□□□ 1,59
Pcdh19Q80TF3 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC24,96■■□□□ 1,59
Pcdh19Q80TF3 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC24,96■■□□□ 1,59
Pcdh19Q80TF3 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC24,95■■□□□ 1,58
Pcdh19Q80TF3 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC24,95■■□□□ 1,58
Pcdh19Q80TF3 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC24,94■■□□□ 1,58
Pcdh19Q80TF3 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC24,94■■□□□ 1,58
Pcdh19Q80TF3 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC24,94■■□□□ 1,58
Pcdh19Q80TF3 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC24,94■■□□□ 1,58
Pcdh19Q80TF3 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC24,93■■□□□ 1,58
Pcdh19Q80TF3 Gm6658-202ENSMUST00000209493 1885 ntBASIC24,93■■□□□ 1,58
Pcdh19Q80TF3 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC24,92■■□□□ 1,58
Pcdh19Q80TF3 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC24,91■■□□□ 1,58
Pcdh19Q80TF3 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC24,91■■□□□ 1,58
Pcdh19Q80TF3 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC24,91■■□□□ 1,58
Pcdh19Q80TF3 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC24,9■■□□□ 1,58
Pcdh19Q80TF3 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC24,9■■□□□ 1,58
Pcdh19Q80TF3 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC24,89■■□□□ 1,58
Pcdh19Q80TF3 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC24,89■■□□□ 1,58
Pcdh19Q80TF3 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC24,89■■□□□ 1,58
Pcdh19Q80TF3 Gm24970-201ENSMUST00000175582 82 ntBASIC24,89■■□□□ 1,58
Pcdh19Q80TF3 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC24,89■■□□□ 1,57
Pcdh19Q80TF3 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC24,88■■□□□ 1,57
Pcdh19Q80TF3 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC24,88■■□□□ 1,57
Pcdh19Q80TF3 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC24,87■■□□□ 1,57
Pcdh19Q80TF3 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC24,87■■□□□ 1,57
Pcdh19Q80TF3 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC24,85■■□□□ 1,57
Pcdh19Q80TF3 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC24,83■■□□□ 1,57
Pcdh19Q80TF3 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC24,82■■□□□ 1,56
Pcdh19Q80TF3 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC24,81■■□□□ 1,56
Pcdh19Q80TF3 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC24,8■■□□□ 1,56
Pcdh19Q80TF3 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC24,78■■□□□ 1,56
Pcdh19Q80TF3 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC24,78■■□□□ 1,56
Pcdh19Q80TF3 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC24,78■■□□□ 1,56
Pcdh19Q80TF3 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC24,76■■□□□ 1,55
Pcdh19Q80TF3 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC24,75■■□□□ 1,55
Pcdh19Q80TF3 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC24,74■■□□□ 1,55
Pcdh19Q80TF3 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC24,74■■□□□ 1,55
Pcdh19Q80TF3 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC24,74■■□□□ 1,55
Pcdh19Q80TF3 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC24,74■■□□□ 1,55
Pcdh19Q80TF3 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC24,73■■□□□ 1,55
Pcdh19Q80TF3 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC24,73■■□□□ 1,55
Pcdh19Q80TF3 Gm43863-201ENSMUST00000203822 1192 ntBASIC24,73■■□□□ 1,55
Pcdh19Q80TF3 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC24,73■■□□□ 1,55
Pcdh19Q80TF3 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC24,72■■□□□ 1,55
Pcdh19Q80TF3 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC24,69■■□□□ 1,54
Pcdh19Q80TF3 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC24,69■■□□□ 1,54
Pcdh19Q80TF3 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC24,69■■□□□ 1,54
Pcdh19Q80TF3 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC24,68■■□□□ 1,54
Pcdh19Q80TF3 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC24,68■■□□□ 1,54
Pcdh19Q80TF3 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC24,67■■□□□ 1,54
Pcdh19Q80TF3 Gm30346-201ENSMUST00000218641 1699 ntBASIC24,66■■□□□ 1,54
Pcdh19Q80TF3 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC24,66■■□□□ 1,54
Pcdh19Q80TF3 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC24,65■■□□□ 1,54
Pcdh19Q80TF3 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC24,65■■□□□ 1,54
Pcdh19Q80TF3 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC24,65■■□□□ 1,54
Pcdh19Q80TF3 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC24,64■■□□□ 1,54
Pcdh19Q80TF3 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC24,64■■□□□ 1,53
Pcdh19Q80TF3 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC24,63■■□□□ 1,53
Pcdh19Q80TF3 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC24,62■■□□□ 1,53
Pcdh19Q80TF3 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC24,62■■□□□ 1,53
Pcdh19Q80TF3 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC24,61■■□□□ 1,53
Pcdh19Q80TF3 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC24,61■■□□□ 1,53
Pcdh19Q80TF3 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC24,6■■□□□ 1,53
Pcdh19Q80TF3 AC157572.2-201ENSMUST00000226970 908 ntBASIC24,6■■□□□ 1,53
Pcdh19Q80TF3 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC24,59■■□□□ 1,53
Pcdh19Q80TF3 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC24,58■■□□□ 1,53
Pcdh19Q80TF3 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC24,58■■□□□ 1,53
Pcdh19Q80TF3 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC24,58■■□□□ 1,52
Pcdh19Q80TF3 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC24,56■■□□□ 1,52
Pcdh19Q80TF3 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC24,56■■□□□ 1,52
Pcdh19Q80TF3 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC24,55■■□□□ 1,52
Pcdh19Q80TF3 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC24,55■■□□□ 1,52
Pcdh19Q80TF3 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC24,54■■□□□ 1,52
Pcdh19Q80TF3 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC24,53■■□□□ 1,52
Pcdh19Q80TF3 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC24,51■■□□□ 1,51
Pcdh19Q80TF3 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC24,51■■□□□ 1,51
Pcdh19Q80TF3 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC24,51■■□□□ 1,51
Retrieved 100 of 76,532 protein–RNA pairs in 10,7 ms