Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Prpf38bQ80SY5 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC26.52■■□□□ 1.84
Prpf38bQ80SY5 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Prpf38bQ80SY5 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
Prpf38bQ80SY5 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC26.46■■□□□ 1.83
Prpf38bQ80SY5 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Prpf38bQ80SY5 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC26.44■■□□□ 1.82
Prpf38bQ80SY5 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
Prpf38bQ80SY5 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC26.42■■□□□ 1.82
Prpf38bQ80SY5 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Prpf38bQ80SY5 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Prpf38bQ80SY5 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Prpf38bQ80SY5 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
Prpf38bQ80SY5 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
Prpf38bQ80SY5 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC26.37■■□□□ 1.81
Prpf38bQ80SY5 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC26.36■■□□□ 1.81
Prpf38bQ80SY5 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC26.36■■□□□ 1.81
Prpf38bQ80SY5 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Prpf38bQ80SY5 Gm6821-201ENSMUST00000107540 542 ntBASIC26.34■■□□□ 1.81
Prpf38bQ80SY5 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC26.33■■□□□ 1.81
Prpf38bQ80SY5 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Prpf38bQ80SY5 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
Prpf38bQ80SY5 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC26.31■■□□□ 1.8
Prpf38bQ80SY5 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Prpf38bQ80SY5 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
Prpf38bQ80SY5 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC26.27■■□□□ 1.8
Prpf38bQ80SY5 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Prpf38bQ80SY5 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Prpf38bQ80SY5 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Prpf38bQ80SY5 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Prpf38bQ80SY5 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Prpf38bQ80SY5 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Prpf38bQ80SY5 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC26.21■■□□□ 1.79
Prpf38bQ80SY5 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
Prpf38bQ80SY5 AC153504.1-201ENSMUST00000218379 2290 ntBASIC26.19■■□□□ 1.78
Prpf38bQ80SY5 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC26.19■■□□□ 1.78
Prpf38bQ80SY5 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
Prpf38bQ80SY5 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
Prpf38bQ80SY5 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
Prpf38bQ80SY5 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Prpf38bQ80SY5 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
Prpf38bQ80SY5 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC26.15■■□□□ 1.78
Prpf38bQ80SY5 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC26.13■■□□□ 1.77
Prpf38bQ80SY5 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Prpf38bQ80SY5 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC26.11■■□□□ 1.77
Prpf38bQ80SY5 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC26.1■■□□□ 1.77
Prpf38bQ80SY5 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
Prpf38bQ80SY5 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC26.08■■□□□ 1.77
Prpf38bQ80SY5 Mipep-204ENSMUST00000225043 1548 ntBASIC26.07■■□□□ 1.76
Prpf38bQ80SY5 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Prpf38bQ80SY5 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Prpf38bQ80SY5 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC26.02■■□□□ 1.76
Prpf38bQ80SY5 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC25.99■■□□□ 1.75
Prpf38bQ80SY5 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC25.99■■□□□ 1.75
Prpf38bQ80SY5 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Prpf38bQ80SY5 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC25.96■■□□□ 1.75
Prpf38bQ80SY5 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
Prpf38bQ80SY5 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC25.94■■□□□ 1.74
Prpf38bQ80SY5 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
Prpf38bQ80SY5 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC25.93■■□□□ 1.74
Prpf38bQ80SY5 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC25.93■■□□□ 1.74
Prpf38bQ80SY5 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC25.91■■□□□ 1.74
Prpf38bQ80SY5 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
Prpf38bQ80SY5 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
Prpf38bQ80SY5 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
Prpf38bQ80SY5 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
Prpf38bQ80SY5 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
Prpf38bQ80SY5 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
Prpf38bQ80SY5 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC25.86■■□□□ 1.73
Prpf38bQ80SY5 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC25.86■■□□□ 1.73
Prpf38bQ80SY5 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
Prpf38bQ80SY5 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC25.85■■□□□ 1.73
Prpf38bQ80SY5 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC25.85■■□□□ 1.73
Prpf38bQ80SY5 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
Prpf38bQ80SY5 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Prpf38bQ80SY5 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
Prpf38bQ80SY5 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
Prpf38bQ80SY5 Mir6538-201ENSMUST00000183713 110 ntBASIC25.83■■□□□ 1.73
Prpf38bQ80SY5 Gm7432-201ENSMUST00000210343 879 ntBASIC25.83■■□□□ 1.73
Prpf38bQ80SY5 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
Prpf38bQ80SY5 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
Prpf38bQ80SY5 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
Prpf38bQ80SY5 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC25.82■■□□□ 1.72
Prpf38bQ80SY5 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
Prpf38bQ80SY5 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC25.81■■□□□ 1.72
Prpf38bQ80SY5 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC25.81■■□□□ 1.72
Prpf38bQ80SY5 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
Prpf38bQ80SY5 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC25.8■■□□□ 1.72
Prpf38bQ80SY5 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC25.8■■□□□ 1.72
Prpf38bQ80SY5 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
Prpf38bQ80SY5 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC25.79■■□□□ 1.72
Prpf38bQ80SY5 Gm43863-201ENSMUST00000203822 1192 ntBASIC25.78■■□□□ 1.72
Prpf38bQ80SY5 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
Prpf38bQ80SY5 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
Prpf38bQ80SY5 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
Prpf38bQ80SY5 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
Prpf38bQ80SY5 Gm42809-201ENSMUST00000198429 1138 ntBASIC25.77■■□□□ 1.72
Prpf38bQ80SY5 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC25.76■■□□□ 1.71
Prpf38bQ80SY5 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC25.76■■□□□ 1.71
Prpf38bQ80SY5 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
Retrieved 100 of 76,532 protein–RNA pairs in 14.2 ms