Protein–RNA interactions for Protein: Q768S4

Rph3al, Rab effector Noc2, mousemouse

Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rph3alQ768S4 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Rph3alQ768S4 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC20.01■□□□□ 0.79
Rph3alQ768S4 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rph3alQ768S4 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rph3alQ768S4 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Rph3alQ768S4 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rph3alQ768S4 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rph3alQ768S4 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
Rph3alQ768S4 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rph3alQ768S4 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rph3alQ768S4 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC19.97■□□□□ 0.79
Rph3alQ768S4 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rph3alQ768S4 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rph3alQ768S4 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rph3alQ768S4 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rph3alQ768S4 Amer2-203ENSMUST00000225247 2662 ntBASIC19.96■□□□□ 0.79
Rph3alQ768S4 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rph3alQ768S4 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Rph3alQ768S4 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC19.95■□□□□ 0.78
Rph3alQ768S4 Mipep-204ENSMUST00000225043 1548 ntBASIC19.95■□□□□ 0.78
Rph3alQ768S4 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Rph3alQ768S4 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rph3alQ768S4 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rph3alQ768S4 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Rph3alQ768S4 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC19.94■□□□□ 0.78
Rph3alQ768S4 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC19.94■□□□□ 0.78
Rph3alQ768S4 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rph3alQ768S4 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Rph3alQ768S4 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC19.92■□□□□ 0.78
Rph3alQ768S4 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rph3alQ768S4 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Rph3alQ768S4 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rph3alQ768S4 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Rph3alQ768S4 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rph3alQ768S4 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rph3alQ768S4 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Rph3alQ768S4 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Rph3alQ768S4 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Rph3alQ768S4 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rph3alQ768S4 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC19.88■□□□□ 0.77
Rph3alQ768S4 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Rph3alQ768S4 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Rph3alQ768S4 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC19.87■□□□□ 0.77
Rph3alQ768S4 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rph3alQ768S4 AL845457.1-201ENSMUST00000197244 68 ntBASIC19.86■□□□□ 0.77
Rph3alQ768S4 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Rph3alQ768S4 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
Rph3alQ768S4 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rph3alQ768S4 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC19.81■□□□□ 0.76
Rph3alQ768S4 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rph3alQ768S4 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rph3alQ768S4 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rph3alQ768S4 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rph3alQ768S4 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rph3alQ768S4 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC19.8■□□□□ 0.76
Rph3alQ768S4 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Rph3alQ768S4 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rph3alQ768S4 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rph3alQ768S4 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Rph3alQ768S4 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rph3alQ768S4 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Rph3alQ768S4 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Rph3alQ768S4 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Rph3alQ768S4 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rph3alQ768S4 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Rph3alQ768S4 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Rph3alQ768S4 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rph3alQ768S4 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Rph3alQ768S4 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rph3alQ768S4 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC19.72■□□□□ 0.75
Rph3alQ768S4 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rph3alQ768S4 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rph3alQ768S4 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rph3alQ768S4 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC19.69■□□□□ 0.74
Rph3alQ768S4 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC19.69■□□□□ 0.74
Rph3alQ768S4 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Rph3alQ768S4 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Rph3alQ768S4 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rph3alQ768S4 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Rph3alQ768S4 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
Rph3alQ768S4 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rph3alQ768S4 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rph3alQ768S4 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rph3alQ768S4 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Rph3alQ768S4 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC19.65■□□□□ 0.74
Rph3alQ768S4 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rph3alQ768S4 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rph3alQ768S4 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Rph3alQ768S4 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Rph3alQ768S4 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rph3alQ768S4 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rph3alQ768S4 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rph3alQ768S4 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Rph3alQ768S4 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rph3alQ768S4 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rph3alQ768S4 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Rph3alQ768S4 Gm25262-201ENSMUST00000174934 133 ntBASIC19.59■□□□□ 0.73
Rph3alQ768S4 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC19.59■□□□□ 0.73
Rph3alQ768S4 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Rph3alQ768S4 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 15.9 ms