Protein–RNA interactions for Protein: Q61239

Fnta, Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FntaQ61239 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
FntaQ61239 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC26.75■■□□□ 1.87
FntaQ61239 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC26.74■■□□□ 1.87
FntaQ61239 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC26.73■■□□□ 1.87
FntaQ61239 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
FntaQ61239 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
FntaQ61239 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC26.7■■□□□ 1.87
FntaQ61239 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
FntaQ61239 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC26.69■■□□□ 1.86
FntaQ61239 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
FntaQ61239 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
FntaQ61239 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
FntaQ61239 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
FntaQ61239 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC26.65■■□□□ 1.86
FntaQ61239 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
FntaQ61239 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
FntaQ61239 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC26.65■■□□□ 1.86
FntaQ61239 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC26.65■■□□□ 1.86
FntaQ61239 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC26.64■■□□□ 1.85
FntaQ61239 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
FntaQ61239 Fezf2-202ENSMUST00000224023 1917 ntBASIC26.61■■□□□ 1.85
FntaQ61239 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC26.61■■□□□ 1.85
FntaQ61239 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC26.61■■□□□ 1.85
FntaQ61239 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
FntaQ61239 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC26.6■■□□□ 1.85
FntaQ61239 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
FntaQ61239 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC26.59■■□□□ 1.85
FntaQ61239 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
FntaQ61239 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
FntaQ61239 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC26.55■■□□□ 1.84
FntaQ61239 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC26.54■■□□□ 1.84
FntaQ61239 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
FntaQ61239 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
FntaQ61239 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC26.51■■□□□ 1.83
FntaQ61239 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
FntaQ61239 AC153890.1-201ENSMUST00000220021 2469 ntBASIC26.49■■□□□ 1.83
FntaQ61239 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
FntaQ61239 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
FntaQ61239 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
FntaQ61239 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
FntaQ61239 AC166822.3-201ENSMUST00000227394 661 ntBASIC26.48■■□□□ 1.83
FntaQ61239 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
FntaQ61239 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC26.45■■□□□ 1.82
FntaQ61239 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC26.45■■□□□ 1.82
FntaQ61239 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
FntaQ61239 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
FntaQ61239 Gm17082-201ENSMUST00000166043 1091 ntBASIC26.43■■□□□ 1.82
FntaQ61239 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
FntaQ61239 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC26.43■■□□□ 1.82
FntaQ61239 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
FntaQ61239 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC26.42■■□□□ 1.82
FntaQ61239 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
FntaQ61239 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
FntaQ61239 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
FntaQ61239 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
FntaQ61239 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
FntaQ61239 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC26.39■■□□□ 1.82
FntaQ61239 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC26.39■■□□□ 1.82
FntaQ61239 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC26.38■■□□□ 1.81
FntaQ61239 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
FntaQ61239 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC26.37■■□□□ 1.81
FntaQ61239 Gm6345-201ENSMUST00000180378 1691 ntBASIC26.37■■□□□ 1.81
FntaQ61239 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
FntaQ61239 Gm27322-201ENSMUST00000184007 104 ntBASIC26.36■■□□□ 1.81
FntaQ61239 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC26.36■■□□□ 1.81
FntaQ61239 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
FntaQ61239 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
FntaQ61239 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC26.35■■□□□ 1.81
FntaQ61239 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC26.34■■□□□ 1.81
FntaQ61239 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC26.31■■□□□ 1.8
FntaQ61239 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
FntaQ61239 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
FntaQ61239 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
FntaQ61239 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
FntaQ61239 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
FntaQ61239 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
FntaQ61239 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC26.29■■□□□ 1.8
FntaQ61239 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC26.29■■□□□ 1.8
FntaQ61239 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
FntaQ61239 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC26.26■■□□□ 1.79
FntaQ61239 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC26.26■■□□□ 1.79
FntaQ61239 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
FntaQ61239 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
FntaQ61239 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
FntaQ61239 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
FntaQ61239 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
FntaQ61239 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC26.24■■□□□ 1.79
FntaQ61239 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC26.23■■□□□ 1.79
FntaQ61239 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
FntaQ61239 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC26.22■■□□□ 1.79
FntaQ61239 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC26.22■■□□□ 1.79
FntaQ61239 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
FntaQ61239 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
FntaQ61239 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC26.21■■□□□ 1.79
FntaQ61239 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC26.2■■□□□ 1.79
FntaQ61239 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
FntaQ61239 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
FntaQ61239 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC26.19■■□□□ 1.78
FntaQ61239 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
FntaQ61239 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Retrieved 100 of 76,532 protein–RNA pairs in 10.6 ms