Protein–RNA interactions for Protein: Q5U452

Trp53rka, MCG14616, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trp53rkaQ5U452 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Trp53rkaQ5U452 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trp53rkaQ5U452 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Trp53rkaQ5U452 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trp53rkaQ5U452 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Trp53rkaQ5U452 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trp53rkaQ5U452 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Trp53rkaQ5U452 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trp53rkaQ5U452 Zfp131-207ENSMUST00000224946 1783 ntBASIC19.67■□□□□ 0.74
Trp53rkaQ5U452 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trp53rkaQ5U452 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trp53rkaQ5U452 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC19.66■□□□□ 0.74
Trp53rkaQ5U452 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trp53rkaQ5U452 Fezf2-202ENSMUST00000224023 1917 ntBASIC19.66■□□□□ 0.74
Trp53rkaQ5U452 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trp53rkaQ5U452 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trp53rkaQ5U452 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
Trp53rkaQ5U452 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Trp53rkaQ5U452 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Trp53rkaQ5U452 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trp53rkaQ5U452 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Trp53rkaQ5U452 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trp53rkaQ5U452 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC19.63■□□□□ 0.73
Trp53rkaQ5U452 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trp53rkaQ5U452 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trp53rkaQ5U452 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trp53rkaQ5U452 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trp53rkaQ5U452 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trp53rkaQ5U452 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC19.6■□□□□ 0.73
Trp53rkaQ5U452 AC153890.1-201ENSMUST00000220021 2469 ntBASIC19.6■□□□□ 0.73
Trp53rkaQ5U452 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Trp53rkaQ5U452 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trp53rkaQ5U452 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trp53rkaQ5U452 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
Trp53rkaQ5U452 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trp53rkaQ5U452 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trp53rkaQ5U452 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Trp53rkaQ5U452 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC19.57■□□□□ 0.72
Trp53rkaQ5U452 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trp53rkaQ5U452 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Trp53rkaQ5U452 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trp53rkaQ5U452 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trp53rkaQ5U452 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC19.54■□□□□ 0.72
Trp53rkaQ5U452 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC19.53■□□□□ 0.72
Trp53rkaQ5U452 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trp53rkaQ5U452 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trp53rkaQ5U452 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Trp53rkaQ5U452 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trp53rkaQ5U452 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Trp53rkaQ5U452 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trp53rkaQ5U452 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Trp53rkaQ5U452 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trp53rkaQ5U452 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Trp53rkaQ5U452 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trp53rkaQ5U452 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC19.49■□□□□ 0.71
Trp53rkaQ5U452 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trp53rkaQ5U452 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trp53rkaQ5U452 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trp53rkaQ5U452 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trp53rkaQ5U452 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC19.47■□□□□ 0.71
Trp53rkaQ5U452 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC19.47■□□□□ 0.71
Trp53rkaQ5U452 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trp53rkaQ5U452 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC19.45■□□□□ 0.7
Trp53rkaQ5U452 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trp53rkaQ5U452 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Trp53rkaQ5U452 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC19.45■□□□□ 0.7
Trp53rkaQ5U452 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Trp53rkaQ5U452 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trp53rkaQ5U452 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trp53rkaQ5U452 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Trp53rkaQ5U452 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trp53rkaQ5U452 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trp53rkaQ5U452 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trp53rkaQ5U452 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trp53rkaQ5U452 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Trp53rkaQ5U452 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Trp53rkaQ5U452 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trp53rkaQ5U452 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Trp53rkaQ5U452 Rab21-202ENSMUST00000218831 843 ntBASIC19.37■□□□□ 0.69
Trp53rkaQ5U452 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trp53rkaQ5U452 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Trp53rkaQ5U452 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC19.35■□□□□ 0.69
Trp53rkaQ5U452 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trp53rkaQ5U452 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Trp53rkaQ5U452 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trp53rkaQ5U452 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC19.35■□□□□ 0.69
Trp53rkaQ5U452 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Trp53rkaQ5U452 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Trp53rkaQ5U452 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trp53rkaQ5U452 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
Trp53rkaQ5U452 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trp53rkaQ5U452 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trp53rkaQ5U452 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trp53rkaQ5U452 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC19.28■□□□□ 0.68
Trp53rkaQ5U452 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trp53rkaQ5U452 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trp53rkaQ5U452 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC19.27■□□□□ 0.68
Trp53rkaQ5U452 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Trp53rkaQ5U452 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trp53rkaQ5U452 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 1272.5 ms