Protein–RNA interactions for Protein: Q3UWR2

Khdc1a, KH homology domain-containing protein 1A, mousemouse

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc1aQ3UWR2 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Khdc1aQ3UWR2 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Khdc1aQ3UWR2 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Khdc1aQ3UWR2 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC18.82■□□□□ 0.6
Khdc1aQ3UWR2 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Khdc1aQ3UWR2 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Khdc1aQ3UWR2 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Khdc1aQ3UWR2 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC18.8■□□□□ 0.6
Khdc1aQ3UWR2 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Khdc1aQ3UWR2 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Khdc1aQ3UWR2 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Khdc1aQ3UWR2 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Khdc1aQ3UWR2 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Khdc1aQ3UWR2 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Khdc1aQ3UWR2 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Khdc1aQ3UWR2 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
Khdc1aQ3UWR2 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Khdc1aQ3UWR2 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Khdc1aQ3UWR2 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Khdc1aQ3UWR2 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC18.71■□□□□ 0.59
Khdc1aQ3UWR2 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Khdc1aQ3UWR2 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC18.7■□□□□ 0.58
Khdc1aQ3UWR2 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
Khdc1aQ3UWR2 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
Khdc1aQ3UWR2 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Khdc1aQ3UWR2 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Khdc1aQ3UWR2 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Khdc1aQ3UWR2 Amer2-203ENSMUST00000225247 2662 ntBASIC18.68■□□□□ 0.58
Khdc1aQ3UWR2 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Khdc1aQ3UWR2 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Khdc1aQ3UWR2 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Khdc1aQ3UWR2 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Khdc1aQ3UWR2 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Khdc1aQ3UWR2 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Khdc1aQ3UWR2 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Khdc1aQ3UWR2 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Khdc1aQ3UWR2 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Khdc1aQ3UWR2 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Khdc1aQ3UWR2 Gm6345-201ENSMUST00000180378 1691 ntBASIC18.63■□□□□ 0.57
Khdc1aQ3UWR2 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Khdc1aQ3UWR2 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Khdc1aQ3UWR2 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Khdc1aQ3UWR2 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Khdc1aQ3UWR2 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC18.6■□□□□ 0.57
Khdc1aQ3UWR2 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
Khdc1aQ3UWR2 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Khdc1aQ3UWR2 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC18.59■□□□□ 0.57
Khdc1aQ3UWR2 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Khdc1aQ3UWR2 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Khdc1aQ3UWR2 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Khdc1aQ3UWR2 Fezf2-202ENSMUST00000224023 1917 ntBASIC18.57■□□□□ 0.56
Khdc1aQ3UWR2 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Khdc1aQ3UWR2 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC18.56■□□□□ 0.56
Khdc1aQ3UWR2 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Khdc1aQ3UWR2 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Khdc1aQ3UWR2 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Khdc1aQ3UWR2 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Khdc1aQ3UWR2 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Khdc1aQ3UWR2 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Khdc1aQ3UWR2 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC18.55■□□□□ 0.56
Khdc1aQ3UWR2 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Khdc1aQ3UWR2 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Khdc1aQ3UWR2 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Khdc1aQ3UWR2 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Khdc1aQ3UWR2 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Khdc1aQ3UWR2 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Khdc1aQ3UWR2 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Khdc1aQ3UWR2 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Khdc1aQ3UWR2 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC18.51■□□□□ 0.55
Khdc1aQ3UWR2 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Khdc1aQ3UWR2 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Khdc1aQ3UWR2 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Khdc1aQ3UWR2 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Khdc1aQ3UWR2 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Khdc1aQ3UWR2 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Khdc1aQ3UWR2 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Khdc1aQ3UWR2 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Khdc1aQ3UWR2 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Khdc1aQ3UWR2 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Khdc1aQ3UWR2 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC18.48■□□□□ 0.55
Khdc1aQ3UWR2 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Khdc1aQ3UWR2 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC18.47■□□□□ 0.55
Khdc1aQ3UWR2 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Khdc1aQ3UWR2 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Khdc1aQ3UWR2 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Khdc1aQ3UWR2 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Khdc1aQ3UWR2 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Khdc1aQ3UWR2 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Khdc1aQ3UWR2 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Khdc1aQ3UWR2 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Khdc1aQ3UWR2 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Khdc1aQ3UWR2 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Khdc1aQ3UWR2 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Khdc1aQ3UWR2 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Khdc1aQ3UWR2 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Khdc1aQ3UWR2 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC18.43■□□□□ 0.54
Khdc1aQ3UWR2 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Khdc1aQ3UWR2 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Khdc1aQ3UWR2 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Khdc1aQ3UWR2 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 12.5 ms