Protein–RNA interactions for Protein: Q3UMB5

Smcr8, Guanine nucleotide exchange protein SMCR8, mousemouse

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smcr8Q3UMB5 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC27.41■■□□□ 1.98
Smcr8Q3UMB5 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC27.41■■□□□ 1.98
Smcr8Q3UMB5 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC27.39■■□□□ 1.98
Smcr8Q3UMB5 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC27.39■■□□□ 1.98
Smcr8Q3UMB5 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
Smcr8Q3UMB5 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC27.36■■□□□ 1.97
Smcr8Q3UMB5 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
Smcr8Q3UMB5 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC27.35■■□□□ 1.97
Smcr8Q3UMB5 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC27.35■■□□□ 1.97
Smcr8Q3UMB5 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC27.34■■□□□ 1.97
Smcr8Q3UMB5 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC27.34■■□□□ 1.97
Smcr8Q3UMB5 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
Smcr8Q3UMB5 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC27.32■■□□□ 1.96
Smcr8Q3UMB5 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC27.31■■□□□ 1.96
Smcr8Q3UMB5 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC27.31■■□□□ 1.96
Smcr8Q3UMB5 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
Smcr8Q3UMB5 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
Smcr8Q3UMB5 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
Smcr8Q3UMB5 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
Smcr8Q3UMB5 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC27.29■■□□□ 1.96
Smcr8Q3UMB5 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
Smcr8Q3UMB5 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
Smcr8Q3UMB5 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
Smcr8Q3UMB5 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
Smcr8Q3UMB5 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC27.27■■□□□ 1.96
Smcr8Q3UMB5 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC27.26■■□□□ 1.95
Smcr8Q3UMB5 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC27.26■■□□□ 1.95
Smcr8Q3UMB5 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
Smcr8Q3UMB5 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
Smcr8Q3UMB5 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC27.24■■□□□ 1.95
Smcr8Q3UMB5 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
Smcr8Q3UMB5 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC27.24■■□□□ 1.95
Smcr8Q3UMB5 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC27.24■■□□□ 1.95
Smcr8Q3UMB5 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
Smcr8Q3UMB5 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC27.23■■□□□ 1.95
Smcr8Q3UMB5 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
Smcr8Q3UMB5 Gm24970-201ENSMUST00000175582 82 ntBASIC27.21■■□□□ 1.95
Smcr8Q3UMB5 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC27.21■■□□□ 1.95
Smcr8Q3UMB5 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.95
Smcr8Q3UMB5 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC27.2■■□□□ 1.94
Smcr8Q3UMB5 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC27.2■■□□□ 1.94
Smcr8Q3UMB5 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC27.2■■□□□ 1.94
Smcr8Q3UMB5 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
Smcr8Q3UMB5 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
Smcr8Q3UMB5 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC27.19■■□□□ 1.94
Smcr8Q3UMB5 Gm2415-204ENSMUST00000190235 2004 ntBASIC27.17■■□□□ 1.94
Smcr8Q3UMB5 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC27.17■■□□□ 1.94
Smcr8Q3UMB5 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
Smcr8Q3UMB5 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
Smcr8Q3UMB5 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC27.16■■□□□ 1.94
Smcr8Q3UMB5 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC27.15■■□□□ 1.94
Smcr8Q3UMB5 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC27.15■■□□□ 1.94
Smcr8Q3UMB5 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC27.13■■□□□ 1.93
Smcr8Q3UMB5 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
Smcr8Q3UMB5 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
Smcr8Q3UMB5 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
Smcr8Q3UMB5 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC27.09■■□□□ 1.93
Smcr8Q3UMB5 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC27.07■■□□□ 1.92
Smcr8Q3UMB5 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC27.07■■□□□ 1.92
Smcr8Q3UMB5 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC27.07■■□□□ 1.92
Smcr8Q3UMB5 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC27.06■■□□□ 1.92
Smcr8Q3UMB5 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC27.05■■□□□ 1.92
Smcr8Q3UMB5 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
Smcr8Q3UMB5 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
Smcr8Q3UMB5 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
Smcr8Q3UMB5 Gm43863-201ENSMUST00000203822 1192 ntBASIC27.02■■□□□ 1.92
Smcr8Q3UMB5 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC27.02■■□□□ 1.92
Smcr8Q3UMB5 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC27.02■■□□□ 1.92
Smcr8Q3UMB5 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
Smcr8Q3UMB5 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC27■■□□□ 1.91
Smcr8Q3UMB5 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
Smcr8Q3UMB5 Gm6658-202ENSMUST00000209493 1885 ntBASIC26.98■■□□□ 1.91
Smcr8Q3UMB5 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
Smcr8Q3UMB5 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
Smcr8Q3UMB5 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC26.95■■□□□ 1.9
Smcr8Q3UMB5 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC26.95■■□□□ 1.9
Smcr8Q3UMB5 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
Smcr8Q3UMB5 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC26.95■■□□□ 1.9
Smcr8Q3UMB5 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC26.94■■□□□ 1.9
Smcr8Q3UMB5 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
Smcr8Q3UMB5 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
Smcr8Q3UMB5 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC26.92■■□□□ 1.9
Smcr8Q3UMB5 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC26.91■■□□□ 1.9
Smcr8Q3UMB5 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
Smcr8Q3UMB5 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC26.87■■□□□ 1.89
Smcr8Q3UMB5 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC26.86■■□□□ 1.89
Smcr8Q3UMB5 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC26.84■■□□□ 1.89
Smcr8Q3UMB5 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC26.84■■□□□ 1.89
Smcr8Q3UMB5 Gm30346-201ENSMUST00000218641 1699 ntBASIC26.84■■□□□ 1.89
Smcr8Q3UMB5 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC26.83■■□□□ 1.89
Smcr8Q3UMB5 AC157572.2-201ENSMUST00000226970 908 ntBASIC26.83■■□□□ 1.89
Smcr8Q3UMB5 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC26.83■■□□□ 1.88
Smcr8Q3UMB5 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
Smcr8Q3UMB5 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
Smcr8Q3UMB5 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC26.82■■□□□ 1.88
Smcr8Q3UMB5 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC26.8■■□□□ 1.88
Smcr8Q3UMB5 Gm9939-201ENSMUST00000067161 1154 ntBASIC26.79■■□□□ 1.88
Smcr8Q3UMB5 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC26.77■■□□□ 1.88
Smcr8Q3UMB5 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC26.77■■□□□ 1.88
Smcr8Q3UMB5 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
Retrieved 100 of 76,532 protein–RNA pairs in 9.1 ms