Protein–RNA interactions for Protein: Q3U4B1

Ssbp4, Single stranded DNA binding protein 4, isoform CRA_b, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssbp4Q3U4B1 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC21,58■■□□□ 1,05
Ssbp4Q3U4B1 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC21,57■■□□□ 1,04
Ssbp4Q3U4B1 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC21,57■■□□□ 1,04
Ssbp4Q3U4B1 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC21,56■■□□□ 1,04
Ssbp4Q3U4B1 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC21,56■■□□□ 1,04
Ssbp4Q3U4B1 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC21,56■■□□□ 1,04
Ssbp4Q3U4B1 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21,55■■□□□ 1,04
Ssbp4Q3U4B1 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC21,55■■□□□ 1,04
Ssbp4Q3U4B1 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC21,54■■□□□ 1,04
Ssbp4Q3U4B1 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC21,54■■□□□ 1,04
Ssbp4Q3U4B1 Gm2415-204ENSMUST00000190235 2004 ntBASIC21,52■■□□□ 1,04
Ssbp4Q3U4B1 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC21,52■■□□□ 1,04
Ssbp4Q3U4B1 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC21,52■■□□□ 1,03
Ssbp4Q3U4B1 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC21,51■■□□□ 1,03
Ssbp4Q3U4B1 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC21,5■■□□□ 1,03
Ssbp4Q3U4B1 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC21,49■■□□□ 1,03
Ssbp4Q3U4B1 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC21,49■■□□□ 1,03
Ssbp4Q3U4B1 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC21,49■■□□□ 1,03
Ssbp4Q3U4B1 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC21,48■■□□□ 1,03
Ssbp4Q3U4B1 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC21,48■■□□□ 1,03
Ssbp4Q3U4B1 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC21,48■■□□□ 1,03
Ssbp4Q3U4B1 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC21,47■■□□□ 1,03
Ssbp4Q3U4B1 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC21,46■■□□□ 1,03
Ssbp4Q3U4B1 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC21,46■■□□□ 1,03
Ssbp4Q3U4B1 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC21,46■■□□□ 1,03
Ssbp4Q3U4B1 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC21,45■■□□□ 1,02
Ssbp4Q3U4B1 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC21,45■■□□□ 1,02
Ssbp4Q3U4B1 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC21,45■■□□□ 1,02
Ssbp4Q3U4B1 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC21,45■■□□□ 1,02
Ssbp4Q3U4B1 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC21,44■■□□□ 1,02
Ssbp4Q3U4B1 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC21,44■■□□□ 1,02
Ssbp4Q3U4B1 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC21,44■■□□□ 1,02
Ssbp4Q3U4B1 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC21,43■■□□□ 1,02
Ssbp4Q3U4B1 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC21,43■■□□□ 1,02
Ssbp4Q3U4B1 Gm24970-201ENSMUST00000175582 82 ntBASIC21,43■■□□□ 1,02
Ssbp4Q3U4B1 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC21,43■■□□□ 1,02
Ssbp4Q3U4B1 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC21,43■■□□□ 1,02
Ssbp4Q3U4B1 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC21,43■■□□□ 1,02
Ssbp4Q3U4B1 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC21,42■■□□□ 1,02
Ssbp4Q3U4B1 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC21,41■■□□□ 1,02
Ssbp4Q3U4B1 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC21,4■■□□□ 1,02
Ssbp4Q3U4B1 Gm6658-202ENSMUST00000209493 1885 ntBASIC21,39■■□□□ 1,02
Ssbp4Q3U4B1 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC21,39■■□□□ 1,01
Ssbp4Q3U4B1 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC21,39■■□□□ 1,01
Ssbp4Q3U4B1 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC21,38■■□□□ 1,01
Ssbp4Q3U4B1 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC21,38■■□□□ 1,01
Ssbp4Q3U4B1 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC21,37■■□□□ 1,01
Ssbp4Q3U4B1 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC21,37■■□□□ 1,01
Ssbp4Q3U4B1 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC21,33■■□□□ 1,01
Ssbp4Q3U4B1 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC21,33■■□□□ 1,01
Ssbp4Q3U4B1 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC21,32■■□□□ 1
Ssbp4Q3U4B1 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC21,3■■□□□ 1
Ssbp4Q3U4B1 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC21,29■■□□□ 1
Ssbp4Q3U4B1 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC21,29■■□□□ 1
Ssbp4Q3U4B1 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC21,28■■□□□ 1
Ssbp4Q3U4B1 Gm43863-201ENSMUST00000203822 1192 ntBASIC21,28■■□□□ 1
Ssbp4Q3U4B1 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC21,28■■□□□ 1
Ssbp4Q3U4B1 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC21,27■■□□□ 1
Ssbp4Q3U4B1 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC21,27■■□□□ 1
Ssbp4Q3U4B1 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC21,27■■□□□ 1
Ssbp4Q3U4B1 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC21,27■■□□□ 1
Ssbp4Q3U4B1 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC21,27■■□□□ 1
Ssbp4Q3U4B1 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC21,25■□□□□ 0,99
Ssbp4Q3U4B1 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC21,25■□□□□ 0,99
Ssbp4Q3U4B1 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC21,24■□□□□ 0,99
Ssbp4Q3U4B1 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC21,23■□□□□ 0,99
Ssbp4Q3U4B1 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC21,22■□□□□ 0,99
Ssbp4Q3U4B1 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC21,22■□□□□ 0,99
Ssbp4Q3U4B1 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC21,22■□□□□ 0,99
Ssbp4Q3U4B1 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC21,21■□□□□ 0,99
Ssbp4Q3U4B1 Gm30346-201ENSMUST00000218641 1699 ntBASIC21,21■□□□□ 0,99
Ssbp4Q3U4B1 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC21,2■□□□□ 0,98
Ssbp4Q3U4B1 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC21,2■□□□□ 0,98
Ssbp4Q3U4B1 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC21,19■□□□□ 0,98
Ssbp4Q3U4B1 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC21,19■□□□□ 0,98
Ssbp4Q3U4B1 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC21,18■□□□□ 0,98
Ssbp4Q3U4B1 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC21,17■□□□□ 0,98
Ssbp4Q3U4B1 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC21,17■□□□□ 0,98
Ssbp4Q3U4B1 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC21,17■□□□□ 0,98
Ssbp4Q3U4B1 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC21,17■□□□□ 0,98
Ssbp4Q3U4B1 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC21,17■□□□□ 0,98
Ssbp4Q3U4B1 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC21,17■□□□□ 0,98
Ssbp4Q3U4B1 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC21,17■□□□□ 0,98
Ssbp4Q3U4B1 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC21,16■□□□□ 0,98
Ssbp4Q3U4B1 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC21,15■□□□□ 0,98
Ssbp4Q3U4B1 AC157572.2-201ENSMUST00000226970 908 ntBASIC21,15■□□□□ 0,98
Ssbp4Q3U4B1 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC21,14■□□□□ 0,98
Ssbp4Q3U4B1 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC21,14■□□□□ 0,97
Ssbp4Q3U4B1 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC21,14■□□□□ 0,97
Ssbp4Q3U4B1 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC21,13■□□□□ 0,97
Ssbp4Q3U4B1 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC21,13■□□□□ 0,97
Ssbp4Q3U4B1 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC21,12■□□□□ 0,97
Ssbp4Q3U4B1 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC21,11■□□□□ 0,97
Ssbp4Q3U4B1 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC21,11■□□□□ 0,97
Ssbp4Q3U4B1 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC21,11■□□□□ 0,97
Ssbp4Q3U4B1 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC21,1■□□□□ 0,97
Ssbp4Q3U4B1 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC21,1■□□□□ 0,97
Ssbp4Q3U4B1 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC21,09■□□□□ 0,97
Ssbp4Q3U4B1 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC21,09■□□□□ 0,97
Ssbp4Q3U4B1 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC21,08■□□□□ 0,97
Retrieved 100 of 76,532 protein–RNA pairs in 40,3 ms