Protein–RNA interactions for Protein: P97801

Smn1, Survival motor neuron protein, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smn1P97801 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Smn1P97801 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Smn1P97801 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Smn1P97801 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
Smn1P97801 Gm6345-201ENSMUST00000180378 1691 ntBASIC21.49■■□□□ 1.03
Smn1P97801 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC21.48■■□□□ 1.03
Smn1P97801 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
Smn1P97801 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Smn1P97801 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Smn1P97801 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Smn1P97801 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Smn1P97801 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Smn1P97801 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Smn1P97801 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Smn1P97801 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Smn1P97801 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC21.44■■□□□ 1.02
Smn1P97801 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
Smn1P97801 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Smn1P97801 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Smn1P97801 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Smn1P97801 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
Smn1P97801 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Smn1P97801 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
Smn1P97801 AC166822.3-201ENSMUST00000227394 661 ntBASIC21.39■■□□□ 1.01
Smn1P97801 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC21.39■■□□□ 1.01
Smn1P97801 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC21.39■■□□□ 1.01
Smn1P97801 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC21.39■■□□□ 1.01
Smn1P97801 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC21.39■■□□□ 1.01
Smn1P97801 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Smn1P97801 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Smn1P97801 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Smn1P97801 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
Smn1P97801 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Smn1P97801 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Smn1P97801 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC21.36■■□□□ 1.01
Smn1P97801 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Smn1P97801 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Smn1P97801 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Smn1P97801 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Smn1P97801 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC21.35■■□□□ 1.01
Smn1P97801 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Smn1P97801 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Smn1P97801 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC21.34■■□□□ 1.01
Smn1P97801 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC21.34■■□□□ 1.01
Smn1P97801 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
Smn1P97801 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Smn1P97801 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Smn1P97801 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC21.32■■□□□ 1
Smn1P97801 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
Smn1P97801 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC21.32■■□□□ 1
Smn1P97801 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Smn1P97801 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC21.32■■□□□ 1
Smn1P97801 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC21.31■■□□□ 1
Smn1P97801 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC21.31■■□□□ 1
Smn1P97801 Fezf2-202ENSMUST00000224023 1917 ntBASIC21.31■■□□□ 1
Smn1P97801 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
Smn1P97801 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
Smn1P97801 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC21.29■■□□□ 1
Smn1P97801 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Smn1P97801 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC21.29■■□□□ 1
Smn1P97801 Gm17082-201ENSMUST00000166043 1091 ntBASIC21.29■■□□□ 1
Smn1P97801 Gm27322-201ENSMUST00000184007 104 ntBASIC21.29■■□□□ 1
Smn1P97801 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Smn1P97801 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC21.28■■□□□ 1
Smn1P97801 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Smn1P97801 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Smn1P97801 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Smn1P97801 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
Smn1P97801 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Smn1P97801 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC21.26■□□□□ 0.99
Smn1P97801 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Smn1P97801 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Smn1P97801 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Smn1P97801 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Smn1P97801 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Smn1P97801 Gm30346-201ENSMUST00000218641 1699 ntBASIC21.22■□□□□ 0.99
Smn1P97801 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Smn1P97801 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Smn1P97801 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Smn1P97801 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC21.21■□□□□ 0.99
Smn1P97801 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
Smn1P97801 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Smn1P97801 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC21.2■□□□□ 0.98
Smn1P97801 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Smn1P97801 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Smn1P97801 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Smn1P97801 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Smn1P97801 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Smn1P97801 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Smn1P97801 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Smn1P97801 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Smn1P97801 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Smn1P97801 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Smn1P97801 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Smn1P97801 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
Smn1P97801 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Smn1P97801 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Smn1P97801 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Smn1P97801 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Smn1P97801 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC21.12■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms