Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC24■■□□□ 1.43
Cacna1aP97445 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC24■■□□□ 1.43
Cacna1aP97445 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC23.99■■□□□ 1.43
Cacna1aP97445 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Cacna1aP97445 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC23.97■■□□□ 1.43
Cacna1aP97445 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC23.96■■□□□ 1.43
Cacna1aP97445 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Cacna1aP97445 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC23.95■■□□□ 1.43
Cacna1aP97445 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.43
Cacna1aP97445 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC23.95■■□□□ 1.43
Cacna1aP97445 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC23.93■■□□□ 1.42
Cacna1aP97445 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Cacna1aP97445 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC23.91■■□□□ 1.42
Cacna1aP97445 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
Cacna1aP97445 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC23.89■■□□□ 1.41
Cacna1aP97445 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC23.89■■□□□ 1.41
Cacna1aP97445 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Cacna1aP97445 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
Cacna1aP97445 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Cacna1aP97445 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Cacna1aP97445 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC23.87■■□□□ 1.41
Cacna1aP97445 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Cacna1aP97445 Gm6821-201ENSMUST00000107540 542 ntBASIC23.83■■□□□ 1.41
Cacna1aP97445 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Cacna1aP97445 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Cacna1aP97445 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC23.83■■□□□ 1.4
Cacna1aP97445 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
Cacna1aP97445 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
Cacna1aP97445 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Cacna1aP97445 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
Cacna1aP97445 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Cacna1aP97445 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Cacna1aP97445 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Cacna1aP97445 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Cacna1aP97445 Gm43863-201ENSMUST00000203822 1192 ntBASIC23.76■■□□□ 1.39
Cacna1aP97445 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Cacna1aP97445 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC23.75■■□□□ 1.39
Cacna1aP97445 AC157572.2-201ENSMUST00000226970 908 ntBASIC23.73■■□□□ 1.39
Cacna1aP97445 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Cacna1aP97445 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Cacna1aP97445 Gm42809-201ENSMUST00000198429 1138 ntBASIC23.71■■□□□ 1.39
Cacna1aP97445 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Cacna1aP97445 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC23.71■■□□□ 1.39
Cacna1aP97445 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Cacna1aP97445 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC23.68■■□□□ 1.38
Cacna1aP97445 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC23.68■■□□□ 1.38
Cacna1aP97445 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC23.67■■□□□ 1.38
Cacna1aP97445 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Cacna1aP97445 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Cacna1aP97445 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.37
Cacna1aP97445 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
Cacna1aP97445 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Cacna1aP97445 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC23.63■■□□□ 1.37
Cacna1aP97445 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
Cacna1aP97445 Gm15039-201ENSMUST00000118914 875 ntBASIC23.62■■□□□ 1.37
Cacna1aP97445 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Cacna1aP97445 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Cacna1aP97445 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC23.6■■□□□ 1.37
Cacna1aP97445 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC23.6■■□□□ 1.37
Cacna1aP97445 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
Cacna1aP97445 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC23.57■■□□□ 1.36
Cacna1aP97445 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Cacna1aP97445 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC23.56■■□□□ 1.36
Cacna1aP97445 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC23.55■■□□□ 1.36
Cacna1aP97445 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Cacna1aP97445 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Cacna1aP97445 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
Cacna1aP97445 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Cacna1aP97445 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Cacna1aP97445 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Cacna1aP97445 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC23.51■■□□□ 1.35
Cacna1aP97445 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Cacna1aP97445 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC23.51■■□□□ 1.35
Cacna1aP97445 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC23.51■■□□□ 1.35
Cacna1aP97445 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
Cacna1aP97445 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Cacna1aP97445 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC23.5■■□□□ 1.35
Cacna1aP97445 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
Cacna1aP97445 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Cacna1aP97445 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC23.48■■□□□ 1.35
Cacna1aP97445 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Cacna1aP97445 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC23.47■■□□□ 1.35
Cacna1aP97445 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC23.46■■□□□ 1.35
Cacna1aP97445 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
Cacna1aP97445 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Cacna1aP97445 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC23.44■■□□□ 1.34
Cacna1aP97445 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC23.43■■□□□ 1.34
Cacna1aP97445 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC23.43■■□□□ 1.34
Cacna1aP97445 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Cacna1aP97445 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
Cacna1aP97445 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC23.42■■□□□ 1.34
Cacna1aP97445 Gm7432-201ENSMUST00000210343 879 ntBASIC23.42■■□□□ 1.34
Cacna1aP97445 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC23.42■■□□□ 1.34
Cacna1aP97445 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC23.41■■□□□ 1.34
Cacna1aP97445 Mir6538-201ENSMUST00000183713 110 ntBASIC23.41■■□□□ 1.34
Cacna1aP97445 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Cacna1aP97445 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC23.38■■□□□ 1.33
Cacna1aP97445 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
Cacna1aP97445 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
Cacna1aP97445 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms