Protein–RNA interactions for Protein: P63154

Crnkl1, Crooked neck-like protein 1, mousemouse

Known RBP Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crnkl1P63154 Gm26115-201ENSMUST00000175605 87 ntBASIC24.74■■□□□ 1.55
Crnkl1P63154 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC24.74■■□□□ 1.55
Crnkl1P63154 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC24.74■■□□□ 1.55
Crnkl1P63154 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Crnkl1P63154 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC24.71■■□□□ 1.55
Crnkl1P63154 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Crnkl1P63154 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Crnkl1P63154 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
Crnkl1P63154 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Crnkl1P63154 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Crnkl1P63154 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Crnkl1P63154 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC24.69■■□□□ 1.54
Crnkl1P63154 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
Crnkl1P63154 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC24.67■■□□□ 1.54
Crnkl1P63154 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Crnkl1P63154 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC24.67■■□□□ 1.54
Crnkl1P63154 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Crnkl1P63154 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Crnkl1P63154 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Crnkl1P63154 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
Crnkl1P63154 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
Crnkl1P63154 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
Crnkl1P63154 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Crnkl1P63154 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC24.6■■□□□ 1.53
Crnkl1P63154 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
Crnkl1P63154 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Crnkl1P63154 Gm8109-201ENSMUST00000194076 746 ntBASIC24.59■■□□□ 1.53
Crnkl1P63154 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC24.57■■□□□ 1.52
Crnkl1P63154 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Crnkl1P63154 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC24.56■■□□□ 1.52
Crnkl1P63154 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Crnkl1P63154 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC24.54■■□□□ 1.52
Crnkl1P63154 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC24.54■■□□□ 1.52
Crnkl1P63154 Gm17082-201ENSMUST00000166043 1091 ntBASIC24.53■■□□□ 1.52
Crnkl1P63154 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Crnkl1P63154 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC24.52■■□□□ 1.52
Crnkl1P63154 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC24.52■■□□□ 1.51
Crnkl1P63154 AC153890.1-201ENSMUST00000220021 2469 ntBASIC24.5■■□□□ 1.51
Crnkl1P63154 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Crnkl1P63154 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
Crnkl1P63154 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Crnkl1P63154 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Crnkl1P63154 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC24.47■■□□□ 1.51
Crnkl1P63154 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Crnkl1P63154 Gm27322-201ENSMUST00000184007 104 ntBASIC24.47■■□□□ 1.51
Crnkl1P63154 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Crnkl1P63154 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC24.46■■□□□ 1.51
Crnkl1P63154 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.51
Crnkl1P63154 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
Crnkl1P63154 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Crnkl1P63154 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC24.45■■□□□ 1.5
Crnkl1P63154 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC24.44■■□□□ 1.5
Crnkl1P63154 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
Crnkl1P63154 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC24.41■■□□□ 1.5
Crnkl1P63154 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Crnkl1P63154 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Crnkl1P63154 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Crnkl1P63154 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC24.39■■□□□ 1.49
Crnkl1P63154 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC24.39■■□□□ 1.49
Crnkl1P63154 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
Crnkl1P63154 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Crnkl1P63154 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Crnkl1P63154 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC24.35■■□□□ 1.49
Crnkl1P63154 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC24.35■■□□□ 1.49
Crnkl1P63154 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC24.35■■□□□ 1.49
Crnkl1P63154 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC24.34■■□□□ 1.49
Crnkl1P63154 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC24.33■■□□□ 1.49
Crnkl1P63154 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC24.33■■□□□ 1.49
Crnkl1P63154 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
Crnkl1P63154 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Crnkl1P63154 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Crnkl1P63154 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC24.31■■□□□ 1.48
Crnkl1P63154 AL845457.1-201ENSMUST00000197244 68 ntBASIC24.31■■□□□ 1.48
Crnkl1P63154 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Crnkl1P63154 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Crnkl1P63154 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Crnkl1P63154 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC24.29■■□□□ 1.48
Crnkl1P63154 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Crnkl1P63154 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC24.28■■□□□ 1.48
Crnkl1P63154 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
Crnkl1P63154 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Crnkl1P63154 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
Crnkl1P63154 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
Crnkl1P63154 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
Crnkl1P63154 Gm6345-201ENSMUST00000180378 1691 ntBASIC24.27■■□□□ 1.48
Crnkl1P63154 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Crnkl1P63154 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC24.25■■□□□ 1.47
Crnkl1P63154 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC24.25■■□□□ 1.47
Crnkl1P63154 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC24.25■■□□□ 1.47
Crnkl1P63154 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC24.25■■□□□ 1.47
Crnkl1P63154 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Crnkl1P63154 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Crnkl1P63154 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Crnkl1P63154 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Crnkl1P63154 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC24.21■■□□□ 1.47
Crnkl1P63154 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC24.2■■□□□ 1.46
Crnkl1P63154 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Crnkl1P63154 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
Crnkl1P63154 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
Crnkl1P63154 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC24.19■■□□□ 1.46
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms