Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Sssca1P56873 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Sssca1P56873 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Sssca1P56873 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Sssca1P56873 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Sssca1P56873 Gm6345-201ENSMUST00000180378 1691 ntBASIC20.22■□□□□ 0.83
Sssca1P56873 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Sssca1P56873 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Sssca1P56873 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Sssca1P56873 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Sssca1P56873 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Sssca1P56873 Gm27322-201ENSMUST00000184007 104 ntBASIC20.17■□□□□ 0.82
Sssca1P56873 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Sssca1P56873 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Sssca1P56873 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Sssca1P56873 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC20.17■□□□□ 0.82
Sssca1P56873 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Sssca1P56873 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
Sssca1P56873 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Sssca1P56873 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Sssca1P56873 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Sssca1P56873 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Sssca1P56873 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Sssca1P56873 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Sssca1P56873 Amer2-203ENSMUST00000225247 2662 ntBASIC20.13■□□□□ 0.81
Sssca1P56873 Gm17082-201ENSMUST00000166043 1091 ntBASIC20.13■□□□□ 0.81
Sssca1P56873 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Sssca1P56873 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Sssca1P56873 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC20.12■□□□□ 0.81
Sssca1P56873 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC20.12■□□□□ 0.81
Sssca1P56873 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC20.1■□□□□ 0.81
Sssca1P56873 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Sssca1P56873 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Sssca1P56873 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Sssca1P56873 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC20.1■□□□□ 0.81
Sssca1P56873 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Sssca1P56873 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Sssca1P56873 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Sssca1P56873 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Sssca1P56873 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC20.08■□□□□ 0.81
Sssca1P56873 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Sssca1P56873 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Sssca1P56873 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Sssca1P56873 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Sssca1P56873 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC20.07■□□□□ 0.8
Sssca1P56873 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Sssca1P56873 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Sssca1P56873 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Sssca1P56873 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
Sssca1P56873 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Sssca1P56873 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC20.04■□□□□ 0.8
Sssca1P56873 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC20.04■□□□□ 0.8
Sssca1P56873 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Sssca1P56873 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Sssca1P56873 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Sssca1P56873 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Sssca1P56873 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Sssca1P56873 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC20.01■□□□□ 0.79
Sssca1P56873 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Sssca1P56873 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Sssca1P56873 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Sssca1P56873 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC20■□□□□ 0.79
Sssca1P56873 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
Sssca1P56873 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Sssca1P56873 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Sssca1P56873 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Sssca1P56873 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC19.96■□□□□ 0.79
Sssca1P56873 Gm30346-201ENSMUST00000218641 1699 ntBASIC19.96■□□□□ 0.79
Sssca1P56873 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Sssca1P56873 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Sssca1P56873 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Sssca1P56873 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Sssca1P56873 Fezf2-202ENSMUST00000224023 1917 ntBASIC19.95■□□□□ 0.78
Sssca1P56873 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Sssca1P56873 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Sssca1P56873 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Sssca1P56873 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Sssca1P56873 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Sssca1P56873 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC19.93■□□□□ 0.78
Sssca1P56873 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Sssca1P56873 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Sssca1P56873 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Sssca1P56873 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC19.92■□□□□ 0.78
Sssca1P56873 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Sssca1P56873 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC19.91■□□□□ 0.78
Sssca1P56873 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Sssca1P56873 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC19.9■□□□□ 0.78
Sssca1P56873 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
Sssca1P56873 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Sssca1P56873 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Sssca1P56873 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC19.89■□□□□ 0.77
Sssca1P56873 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Sssca1P56873 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Sssca1P56873 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Sssca1P56873 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Sssca1P56873 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Sssca1P56873 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC19.87■□□□□ 0.77
Sssca1P56873 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Sssca1P56873 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Sssca1P56873 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 10.7 ms