Protein–RNA interactions for Protein: P53776

Lhx4, LIM/homeobox protein Lhx4, mousemouse

Predictions only

Length 390 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx4P53776 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Lhx4P53776 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Lhx4P53776 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Lhx4P53776 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC21.08■□□□□ 0.97
Lhx4P53776 Zxda-201ENSMUST00000117281 2621 ntBASIC21.07■□□□□ 0.96
Lhx4P53776 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Lhx4P53776 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC21.07■□□□□ 0.96
Lhx4P53776 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Lhx4P53776 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Lhx4P53776 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Lhx4P53776 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Lhx4P53776 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Lhx4P53776 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
Lhx4P53776 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Lhx4P53776 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Lhx4P53776 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Lhx4P53776 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Lhx4P53776 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Lhx4P53776 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Lhx4P53776 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Lhx4P53776 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Lhx4P53776 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC21■□□□□ 0.95
Lhx4P53776 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Lhx4P53776 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Lhx4P53776 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC20.98■□□□□ 0.95
Lhx4P53776 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC20.98■□□□□ 0.95
Lhx4P53776 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Lhx4P53776 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Lhx4P53776 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC20.97■□□□□ 0.95
Lhx4P53776 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
Lhx4P53776 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Lhx4P53776 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Lhx4P53776 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Lhx4P53776 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Lhx4P53776 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC20.95■□□□□ 0.95
Lhx4P53776 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Lhx4P53776 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Lhx4P53776 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Lhx4P53776 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Lhx4P53776 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC20.94■□□□□ 0.94
Lhx4P53776 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Lhx4P53776 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Lhx4P53776 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
Lhx4P53776 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC20.92■□□□□ 0.94
Lhx4P53776 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Lhx4P53776 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Lhx4P53776 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Lhx4P53776 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Lhx4P53776 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Lhx4P53776 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Lhx4P53776 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC20.9■□□□□ 0.94
Lhx4P53776 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC20.9■□□□□ 0.94
Lhx4P53776 Tdp2-203ENSMUST00000223804 1136 ntBASIC20.9■□□□□ 0.94
Lhx4P53776 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Lhx4P53776 Gm9905-201ENSMUST00000065740 1845 ntBASIC20.89■□□□□ 0.93
Lhx4P53776 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Lhx4P53776 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Lhx4P53776 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Lhx4P53776 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Lhx4P53776 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC20.85■□□□□ 0.93
Lhx4P53776 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Lhx4P53776 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Lhx4P53776 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Lhx4P53776 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Lhx4P53776 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Lhx4P53776 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC20.8■□□□□ 0.92
Lhx4P53776 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Lhx4P53776 Gm6206-201ENSMUST00000133472 2199 ntBASIC20.79■□□□□ 0.92
Lhx4P53776 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Lhx4P53776 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Lhx4P53776 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Lhx4P53776 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Lhx4P53776 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Lhx4P53776 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Lhx4P53776 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Lhx4P53776 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Lhx4P53776 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Lhx4P53776 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Lhx4P53776 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Lhx4P53776 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Lhx4P53776 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Lhx4P53776 Gm45855-201ENSMUST00000212546 880 ntBASIC20.73■□□□□ 0.91
Lhx4P53776 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Lhx4P53776 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Lhx4P53776 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Lhx4P53776 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Lhx4P53776 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Lhx4P53776 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Lhx4P53776 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Lhx4P53776 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Lhx4P53776 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Lhx4P53776 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Lhx4P53776 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Lhx4P53776 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Lhx4P53776 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Lhx4P53776 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Lhx4P53776 Gm30346-201ENSMUST00000218641 1699 ntBASIC20.67■□□□□ 0.9
Lhx4P53776 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Lhx4P53776 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Lhx4P53776 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC20.66■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms