Protein–RNA interactions for Protein: P51906

Slc1a1, Excitatory amino acid transporter 3, mousemouse

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc1a1P51906 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC26.67■■□□□ 1.86
Slc1a1P51906 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC26.66■■□□□ 1.86
Slc1a1P51906 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
Slc1a1P51906 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
Slc1a1P51906 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC26.64■■□□□ 1.85
Slc1a1P51906 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
Slc1a1P51906 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC26.62■■□□□ 1.85
Slc1a1P51906 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
Slc1a1P51906 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC26.6■■□□□ 1.85
Slc1a1P51906 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
Slc1a1P51906 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC26.59■■□□□ 1.85
Slc1a1P51906 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC26.58■■□□□ 1.85
Slc1a1P51906 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC26.57■■□□□ 1.84
Slc1a1P51906 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC26.57■■□□□ 1.84
Slc1a1P51906 Peli2-204ENSMUST00000226513 1320 ntBASIC26.56■■□□□ 1.84
Slc1a1P51906 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC26.55■■□□□ 1.84
Slc1a1P51906 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Slc1a1P51906 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Slc1a1P51906 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
Slc1a1P51906 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Slc1a1P51906 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC26.53■■□□□ 1.84
Slc1a1P51906 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Slc1a1P51906 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Slc1a1P51906 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
Slc1a1P51906 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Slc1a1P51906 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Slc1a1P51906 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Slc1a1P51906 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
Slc1a1P51906 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC26.5■■□□□ 1.83
Slc1a1P51906 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Slc1a1P51906 Gm30346-201ENSMUST00000218641 1699 ntBASIC26.47■■□□□ 1.83
Slc1a1P51906 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
Slc1a1P51906 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
Slc1a1P51906 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC26.47■■□□□ 1.83
Slc1a1P51906 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
Slc1a1P51906 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
Slc1a1P51906 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Slc1a1P51906 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC26.45■■□□□ 1.83
Slc1a1P51906 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
Slc1a1P51906 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
Slc1a1P51906 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC26.44■■□□□ 1.82
Slc1a1P51906 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC26.44■■□□□ 1.82
Slc1a1P51906 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC26.44■■□□□ 1.82
Slc1a1P51906 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC26.43■■□□□ 1.82
Slc1a1P51906 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
Slc1a1P51906 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
Slc1a1P51906 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC26.39■■□□□ 1.82
Slc1a1P51906 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Slc1a1P51906 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
Slc1a1P51906 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
Slc1a1P51906 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Slc1a1P51906 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
Slc1a1P51906 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Slc1a1P51906 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Slc1a1P51906 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Slc1a1P51906 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC26.35■■□□□ 1.81
Slc1a1P51906 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC26.35■■□□□ 1.81
Slc1a1P51906 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Slc1a1P51906 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Slc1a1P51906 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC26.33■■□□□ 1.8
Slc1a1P51906 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC26.31■■□□□ 1.8
Slc1a1P51906 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC26.31■■□□□ 1.8
Slc1a1P51906 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Slc1a1P51906 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC26.3■■□□□ 1.8
Slc1a1P51906 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Slc1a1P51906 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Slc1a1P51906 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
Slc1a1P51906 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
Slc1a1P51906 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Slc1a1P51906 Amer2-203ENSMUST00000225247 2662 ntBASIC26.26■■□□□ 1.79
Slc1a1P51906 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC26.26■■□□□ 1.79
Slc1a1P51906 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
Slc1a1P51906 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
Slc1a1P51906 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC26.24■■□□□ 1.79
Slc1a1P51906 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Slc1a1P51906 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC26.23■■□□□ 1.79
Slc1a1P51906 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC26.23■■□□□ 1.79
Slc1a1P51906 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Slc1a1P51906 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Slc1a1P51906 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC26.21■■□□□ 1.79
Slc1a1P51906 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC26.21■■□□□ 1.79
Slc1a1P51906 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Slc1a1P51906 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
Slc1a1P51906 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Slc1a1P51906 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Slc1a1P51906 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Slc1a1P51906 Gm24804-201ENSMUST00000174982 85 ntBASIC26.16■■□□□ 1.78
Slc1a1P51906 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Slc1a1P51906 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Slc1a1P51906 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
Slc1a1P51906 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC26.14■■□□□ 1.77
Slc1a1P51906 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Slc1a1P51906 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC26.13■■□□□ 1.77
Slc1a1P51906 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Slc1a1P51906 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Slc1a1P51906 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
Slc1a1P51906 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC26.11■■□□□ 1.77
Slc1a1P51906 Fezf2-202ENSMUST00000224023 1917 ntBASIC26.1■■□□□ 1.77
Slc1a1P51906 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Slc1a1P51906 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC26.1■■□□□ 1.77
Retrieved 100 of 76,532 protein–RNA pairs in 61.3 ms