Protein–RNA interactions for Protein: P11378

Tnp2, Nuclear transition protein 2, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnp2P11378 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Tnp2P11378 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC16.49■□□□□ 0.23
Tnp2P11378 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Tnp2P11378 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Tnp2P11378 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Tnp2P11378 Mipep-204ENSMUST00000225043 1548 ntBASIC16.45■□□□□ 0.22
Tnp2P11378 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Tnp2P11378 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tnp2P11378 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tnp2P11378 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC16.41■□□□□ 0.22
Tnp2P11378 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC16.41■□□□□ 0.22
Tnp2P11378 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tnp2P11378 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tnp2P11378 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tnp2P11378 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC16.4■□□□□ 0.22
Tnp2P11378 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Tnp2P11378 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tnp2P11378 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC16.39■□□□□ 0.21
Tnp2P11378 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Tnp2P11378 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Tnp2P11378 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC16.37■□□□□ 0.21
Tnp2P11378 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Tnp2P11378 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Tnp2P11378 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Tnp2P11378 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Tnp2P11378 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Tnp2P11378 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Tnp2P11378 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
Tnp2P11378 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Tnp2P11378 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Tnp2P11378 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC16.34■□□□□ 0.21
Tnp2P11378 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Tnp2P11378 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Tnp2P11378 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Tnp2P11378 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Tnp2P11378 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Tnp2P11378 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Tnp2P11378 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC16.31■□□□□ 0.2
Tnp2P11378 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Tnp2P11378 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tnp2P11378 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tnp2P11378 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC16.29■□□□□ 0.2
Tnp2P11378 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC16.29■□□□□ 0.2
Tnp2P11378 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC16.29■□□□□ 0.2
Tnp2P11378 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tnp2P11378 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Tnp2P11378 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC16.28■□□□□ 0.2
Tnp2P11378 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Tnp2P11378 Gm43863-201ENSMUST00000203822 1192 ntBASIC16.28■□□□□ 0.2
Tnp2P11378 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Tnp2P11378 Gm42809-201ENSMUST00000198429 1138 ntBASIC16.27■□□□□ 0.2
Tnp2P11378 Gm7432-201ENSMUST00000210343 879 ntBASIC16.27■□□□□ 0.2
Tnp2P11378 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Tnp2P11378 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Tnp2P11378 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Tnp2P11378 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Tnp2P11378 Mir6538-201ENSMUST00000183713 110 ntBASIC16.26■□□□□ 0.19
Tnp2P11378 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Tnp2P11378 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Tnp2P11378 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Tnp2P11378 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Tnp2P11378 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
Tnp2P11378 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC16.24■□□□□ 0.19
Tnp2P11378 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Tnp2P11378 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Tnp2P11378 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Tnp2P11378 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Tnp2P11378 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Tnp2P11378 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC16.21■□□□□ 0.19
Tnp2P11378 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Tnp2P11378 Cap2-205ENSMUST00000225824 1634 ntBASIC16.2■□□□□ 0.18
Tnp2P11378 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC16.2■□□□□ 0.18
Tnp2P11378 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC16.19■□□□□ 0.18
Tnp2P11378 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC16.19■□□□□ 0.18
Tnp2P11378 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Tnp2P11378 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Tnp2P11378 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
Tnp2P11378 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tnp2P11378 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Tnp2P11378 Gm11175-201ENSMUST00000116172 543 ntBASIC16.17■□□□□ 0.18
Tnp2P11378 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
Tnp2P11378 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tnp2P11378 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tnp2P11378 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tnp2P11378 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Tnp2P11378 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC16.15■□□□□ 0.18
Tnp2P11378 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Tnp2P11378 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Tnp2P11378 Gm15039-201ENSMUST00000118914 875 ntBASIC16.14■□□□□ 0.17
Tnp2P11378 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC16.13■□□□□ 0.17
Tnp2P11378 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
Tnp2P11378 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Tnp2P11378 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Tnp2P11378 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Tnp2P11378 Nkain2-201ENSMUST00000092602 558 ntBASIC16.12■□□□□ 0.17
Tnp2P11378 Gm11599-201ENSMUST00000118720 878 ntBASIC16.11■□□□□ 0.17
Tnp2P11378 AC157572.2-201ENSMUST00000226970 908 ntBASIC16.11■□□□□ 0.17
Tnp2P11378 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Tnp2P11378 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Tnp2P11378 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 10.9 ms