Protein–RNA interactions for Protein: P07903

Ercc1, DNA excision repair protein ERCC-1, mousemouse

Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc1P07903 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Ercc1P07903 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ercc1P07903 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ercc1P07903 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ercc1P07903 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ercc1P07903 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ercc1P07903 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC20.93■□□□□ 0.94
Ercc1P07903 AL845457.1-201ENSMUST00000197244 68 ntBASIC20.91■□□□□ 0.94
Ercc1P07903 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ercc1P07903 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC20.9■□□□□ 0.94
Ercc1P07903 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ercc1P07903 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC20.9■□□□□ 0.94
Ercc1P07903 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Ercc1P07903 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Ercc1P07903 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
Ercc1P07903 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Ercc1P07903 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Ercc1P07903 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ercc1P07903 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Ercc1P07903 Fezf2-202ENSMUST00000224023 1917 ntBASIC20.85■□□□□ 0.93
Ercc1P07903 Gm6345-201ENSMUST00000180378 1691 ntBASIC20.84■□□□□ 0.93
Ercc1P07903 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Ercc1P07903 Amer2-203ENSMUST00000225247 2662 ntBASIC20.83■□□□□ 0.93
Ercc1P07903 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ercc1P07903 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
Ercc1P07903 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Ercc1P07903 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC20.81■□□□□ 0.92
Ercc1P07903 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ercc1P07903 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ercc1P07903 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC20.78■□□□□ 0.92
Ercc1P07903 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC20.78■□□□□ 0.92
Ercc1P07903 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ercc1P07903 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC20.76■□□□□ 0.91
Ercc1P07903 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ercc1P07903 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ercc1P07903 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ercc1P07903 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Ercc1P07903 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ercc1P07903 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Ercc1P07903 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ercc1P07903 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC20.72■□□□□ 0.91
Ercc1P07903 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC20.71■□□□□ 0.91
Ercc1P07903 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ercc1P07903 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ercc1P07903 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ercc1P07903 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Ercc1P07903 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ercc1P07903 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Ercc1P07903 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ercc1P07903 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Ercc1P07903 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Ercc1P07903 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ercc1P07903 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC20.67■□□□□ 0.9
Ercc1P07903 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC20.66■□□□□ 0.9
Ercc1P07903 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Ercc1P07903 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ercc1P07903 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ercc1P07903 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Ercc1P07903 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Ercc1P07903 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ercc1P07903 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Ercc1P07903 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC20.64■□□□□ 0.89
Ercc1P07903 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Ercc1P07903 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Ercc1P07903 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ercc1P07903 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC20.62■□□□□ 0.89
Ercc1P07903 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ercc1P07903 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Ercc1P07903 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ercc1P07903 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ercc1P07903 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ercc1P07903 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC20.6■□□□□ 0.89
Ercc1P07903 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ercc1P07903 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ercc1P07903 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ercc1P07903 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Ercc1P07903 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Ercc1P07903 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Ercc1P07903 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ercc1P07903 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Ercc1P07903 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Ercc1P07903 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ercc1P07903 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC20.55■□□□□ 0.88
Ercc1P07903 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ercc1P07903 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC20.54■□□□□ 0.88
Ercc1P07903 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ercc1P07903 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ercc1P07903 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ercc1P07903 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ercc1P07903 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ercc1P07903 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Ercc1P07903 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Ercc1P07903 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ercc1P07903 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.87
Ercc1P07903 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ercc1P07903 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Ercc1P07903 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ercc1P07903 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ercc1P07903 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Ercc1P07903 Gm27322-201ENSMUST00000184007 104 ntBASIC20.49■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 69.7 ms