Protein–RNA interactions for Protein: P04946

Ig kappa chain V-V region NQ5-89.4, mousemouse

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04946 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
P04946 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
P04946 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
P04946 Gm9397-201ENSMUST00000200125 605 ntBASIC22.2■■□□□ 1.14
P04946 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC22.2■■□□□ 1.14
P04946 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC22.19■■□□□ 1.14
P04946 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
P04946 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
P04946 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
P04946 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC22.17■■□□□ 1.14
P04946 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
P04946 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
P04946 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
P04946 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC22.17■■□□□ 1.14
P04946 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
P04946 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
P04946 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC22.17■■□□□ 1.14
P04946 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC22.16■■□□□ 1.14
P04946 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC22.16■■□□□ 1.14
P04946 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC22.15■■□□□ 1.14
P04946 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC22.15■■□□□ 1.14
P04946 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
P04946 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC22.13■■□□□ 1.13
P04946 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC22.13■■□□□ 1.13
P04946 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
P04946 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC22.12■■□□□ 1.13
P04946 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
P04946 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
P04946 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC22.1■■□□□ 1.13
P04946 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC22.09■■□□□ 1.13
P04946 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC22.08■■□□□ 1.13
P04946 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
P04946 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
P04946 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC22.05■■□□□ 1.12
P04946 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC22.05■■□□□ 1.12
P04946 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
P04946 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
P04946 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC22.03■■□□□ 1.12
P04946 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
P04946 Gm24970-201ENSMUST00000175582 82 ntBASIC22.02■■□□□ 1.12
P04946 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC22.02■■□□□ 1.12
P04946 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
P04946 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC22.01■■□□□ 1.11
P04946 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
P04946 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
P04946 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
P04946 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
P04946 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
P04946 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
P04946 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC21.99■■□□□ 1.11
P04946 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC21.98■■□□□ 1.11
P04946 Gm30346-201ENSMUST00000218641 1699 ntBASIC21.98■■□□□ 1.11
P04946 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC21.95■■□□□ 1.1
P04946 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC21.95■■□□□ 1.1
P04946 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
P04946 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
P04946 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC21.94■■□□□ 1.1
P04946 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
P04946 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
P04946 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
P04946 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
P04946 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
P04946 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
P04946 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
P04946 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
P04946 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
P04946 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
P04946 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
P04946 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
P04946 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
P04946 Gm43863-201ENSMUST00000203822 1192 ntBASIC21.87■■□□□ 1.09
P04946 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC21.87■■□□□ 1.09
P04946 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
P04946 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
P04946 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
P04946 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
P04946 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
P04946 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
P04946 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
P04946 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
P04946 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
P04946 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
P04946 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC21.79■■□□□ 1.08
P04946 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC21.79■■□□□ 1.08
P04946 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
P04946 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
P04946 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
P04946 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
P04946 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC21.78■■□□□ 1.08
P04946 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
P04946 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
P04946 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
P04946 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
P04946 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
P04946 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
P04946 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
P04946 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC21.74■■□□□ 1.07
P04946 AC157572.2-201ENSMUST00000226970 908 ntBASIC21.74■■□□□ 1.07
P04946 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
P04946 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 12.2 ms