Protein–RNA interactions for Protein: P02088

Hbb-b1, Hemoglobin subunit beta-1, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hbb-b1P02088 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Hbb-b1P02088 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC17.86■□□□□ 0.45
Hbb-b1P02088 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Hbb-b1P02088 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Hbb-b1P02088 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Hbb-b1P02088 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Hbb-b1P02088 AC153890.1-201ENSMUST00000220021 2469 ntBASIC17.85■□□□□ 0.45
Hbb-b1P02088 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Hbb-b1P02088 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Hbb-b1P02088 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Hbb-b1P02088 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC17.83■□□□□ 0.45
Hbb-b1P02088 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Hbb-b1P02088 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Hbb-b1P02088 Gm23366-201ENSMUST00000175022 89 ntBASIC17.82■□□□□ 0.44
Hbb-b1P02088 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC17.81■□□□□ 0.44
Hbb-b1P02088 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Hbb-b1P02088 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Hbb-b1P02088 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Hbb-b1P02088 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Hbb-b1P02088 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Hbb-b1P02088 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Hbb-b1P02088 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Hbb-b1P02088 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Hbb-b1P02088 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Hbb-b1P02088 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hbb-b1P02088 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC17.75■□□□□ 0.43
Hbb-b1P02088 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hbb-b1P02088 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hbb-b1P02088 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Hbb-b1P02088 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Hbb-b1P02088 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Hbb-b1P02088 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Hbb-b1P02088 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Hbb-b1P02088 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Hbb-b1P02088 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Hbb-b1P02088 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Hbb-b1P02088 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Hbb-b1P02088 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Hbb-b1P02088 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Hbb-b1P02088 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
Hbb-b1P02088 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC17.7■□□□□ 0.42
Hbb-b1P02088 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Hbb-b1P02088 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Hbb-b1P02088 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hbb-b1P02088 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC17.68■□□□□ 0.42
Hbb-b1P02088 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hbb-b1P02088 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hbb-b1P02088 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hbb-b1P02088 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hbb-b1P02088 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Hbb-b1P02088 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hbb-b1P02088 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
Hbb-b1P02088 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hbb-b1P02088 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Hbb-b1P02088 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.41
Hbb-b1P02088 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Hbb-b1P02088 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC17.63■□□□□ 0.41
Hbb-b1P02088 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Hbb-b1P02088 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Hbb-b1P02088 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Hbb-b1P02088 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hbb-b1P02088 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hbb-b1P02088 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hbb-b1P02088 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Hbb-b1P02088 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC17.61■□□□□ 0.41
Hbb-b1P02088 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hbb-b1P02088 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Hbb-b1P02088 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Hbb-b1P02088 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hbb-b1P02088 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hbb-b1P02088 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Hbb-b1P02088 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Hbb-b1P02088 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Hbb-b1P02088 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Hbb-b1P02088 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hbb-b1P02088 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC17.56■□□□□ 0.4
Hbb-b1P02088 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Hbb-b1P02088 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Hbb-b1P02088 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Hbb-b1P02088 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hbb-b1P02088 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hbb-b1P02088 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC17.54■□□□□ 0.4
Hbb-b1P02088 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hbb-b1P02088 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hbb-b1P02088 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Hbb-b1P02088 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hbb-b1P02088 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC17.52■□□□□ 0.4
Hbb-b1P02088 Gm6345-201ENSMUST00000180378 1691 ntBASIC17.52■□□□□ 0.4
Hbb-b1P02088 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hbb-b1P02088 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC17.5■□□□□ 0.39
Hbb-b1P02088 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Hbb-b1P02088 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Hbb-b1P02088 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hbb-b1P02088 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hbb-b1P02088 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Hbb-b1P02088 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
Hbb-b1P02088 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Hbb-b1P02088 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Hbb-b1P02088 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hbb-b1P02088 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms