Protein–RNA interactions for Protein: O88253

Gm10226, Mszf39 (Fragment), mousemouse

Predictions only

Length 85 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10226O88253 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Gm10226O88253 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Gm10226O88253 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Gm10226O88253 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Gm10226O88253 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Gm10226O88253 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Gm10226O88253 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Gm10226O88253 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Gm10226O88253 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Gm10226O88253 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Gm10226O88253 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Gm10226O88253 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Gm10226O88253 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Gm10226O88253 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Gm10226O88253 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
Gm10226O88253 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Gm10226O88253 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Gm10226O88253 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Gm10226O88253 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Gm10226O88253 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Gm10226O88253 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Gm10226O88253 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Gm10226O88253 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Gm10226O88253 Gm9397-201ENSMUST00000200125 605 ntBASIC19.77■□□□□ 0.76
Gm10226O88253 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Gm10226O88253 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC19.76■□□□□ 0.75
Gm10226O88253 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC19.76■□□□□ 0.75
Gm10226O88253 Gm30346-201ENSMUST00000218641 1699 ntBASIC19.75■□□□□ 0.75
Gm10226O88253 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Gm10226O88253 Gm45855-201ENSMUST00000212546 880 ntBASIC19.75■□□□□ 0.75
Gm10226O88253 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Gm10226O88253 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Gm10226O88253 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC19.74■□□□□ 0.75
Gm10226O88253 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Gm10226O88253 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC19.72■□□□□ 0.75
Gm10226O88253 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Gm10226O88253 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC19.71■□□□□ 0.75
Gm10226O88253 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Gm10226O88253 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Gm10226O88253 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Gm10226O88253 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Gm10226O88253 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Gm10226O88253 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Gm10226O88253 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Gm10226O88253 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Gm10226O88253 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC19.66■□□□□ 0.74
Gm10226O88253 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Gm10226O88253 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC19.66■□□□□ 0.74
Gm10226O88253 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC19.65■□□□□ 0.74
Gm10226O88253 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Gm10226O88253 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Gm10226O88253 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC19.64■□□□□ 0.73
Gm10226O88253 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Gm10226O88253 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Gm10226O88253 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Gm10226O88253 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Gm10226O88253 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Gm10226O88253 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Gm10226O88253 Gm24970-201ENSMUST00000175582 82 ntBASIC19.62■□□□□ 0.73
Gm10226O88253 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC19.62■□□□□ 0.73
Gm10226O88253 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Gm10226O88253 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Gm10226O88253 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Gm10226O88253 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Gm10226O88253 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC19.61■□□□□ 0.73
Gm10226O88253 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC19.6■□□□□ 0.73
Gm10226O88253 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Gm10226O88253 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Gm10226O88253 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Gm10226O88253 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Gm10226O88253 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Gm10226O88253 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
Gm10226O88253 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Gm10226O88253 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC19.56■□□□□ 0.72
Gm10226O88253 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Gm10226O88253 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
Gm10226O88253 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Gm10226O88253 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Gm10226O88253 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC19.55■□□□□ 0.72
Gm10226O88253 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Gm10226O88253 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
Gm10226O88253 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC19.54■□□□□ 0.72
Gm10226O88253 Gm43863-201ENSMUST00000203822 1192 ntBASIC19.53■□□□□ 0.72
Gm10226O88253 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC19.53■□□□□ 0.72
Gm10226O88253 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Gm10226O88253 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC19.52■□□□□ 0.72
Gm10226O88253 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Gm10226O88253 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Gm10226O88253 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Gm10226O88253 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Gm10226O88253 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Gm10226O88253 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Gm10226O88253 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC19.5■□□□□ 0.71
Gm10226O88253 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Gm10226O88253 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Gm10226O88253 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Gm10226O88253 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Gm10226O88253 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Gm10226O88253 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Gm10226O88253 Gm6345-201ENSMUST00000180378 1691 ntBASIC19.49■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms