Protein–RNA interactions for Protein: O54907

Tnfsf12, Tumor necrosis factor ligand superfamily member 12, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf12O54907 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Tnfsf12O54907 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC20.65■□□□□ 0.9
Tnfsf12O54907 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Tnfsf12O54907 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC20.63■□□□□ 0.89
Tnfsf12O54907 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Tnfsf12O54907 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Tnfsf12O54907 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Tnfsf12O54907 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Tnfsf12O54907 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Tnfsf12O54907 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Tnfsf12O54907 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC20.57■□□□□ 0.88
Tnfsf12O54907 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC20.57■□□□□ 0.88
Tnfsf12O54907 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Tnfsf12O54907 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Tnfsf12O54907 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Tnfsf12O54907 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Tnfsf12O54907 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Tnfsf12O54907 Zxda-201ENSMUST00000117281 2621 ntBASIC20.54■□□□□ 0.88
Tnfsf12O54907 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Tnfsf12O54907 Gm6206-201ENSMUST00000133472 2199 ntBASIC20.53■□□□□ 0.88
Tnfsf12O54907 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Tnfsf12O54907 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Tnfsf12O54907 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Tnfsf12O54907 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Tnfsf12O54907 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Tnfsf12O54907 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Tnfsf12O54907 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Tnfsf12O54907 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC20.48■□□□□ 0.87
Tnfsf12O54907 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Tnfsf12O54907 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Tnfsf12O54907 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Tnfsf12O54907 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Tnfsf12O54907 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Tnfsf12O54907 Gm9905-201ENSMUST00000065740 1845 ntBASIC20.46■□□□□ 0.87
Tnfsf12O54907 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Tnfsf12O54907 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Tnfsf12O54907 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Tnfsf12O54907 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Tnfsf12O54907 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
Tnfsf12O54907 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Tnfsf12O54907 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Tnfsf12O54907 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Tnfsf12O54907 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Tnfsf12O54907 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Tnfsf12O54907 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC20.42■□□□□ 0.86
Tnfsf12O54907 Gm43445-201ENSMUST00000198564 2091 ntBASIC20.42■□□□□ 0.86
Tnfsf12O54907 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Tnfsf12O54907 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Tnfsf12O54907 Gm16148-201ENSMUST00000119653 893 ntBASIC20.41■□□□□ 0.86
Tnfsf12O54907 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Tnfsf12O54907 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Tnfsf12O54907 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Tnfsf12O54907 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Tnfsf12O54907 Gm30346-201ENSMUST00000218641 1699 ntBASIC20.39■□□□□ 0.86
Tnfsf12O54907 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Tnfsf12O54907 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC20.38■□□□□ 0.85
Tnfsf12O54907 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Tnfsf12O54907 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Tnfsf12O54907 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC20.36■□□□□ 0.85
Tnfsf12O54907 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Tnfsf12O54907 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Tnfsf12O54907 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Tnfsf12O54907 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Tnfsf12O54907 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Tnfsf12O54907 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Tnfsf12O54907 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Tnfsf12O54907 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Tnfsf12O54907 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Tnfsf12O54907 Gm6345-201ENSMUST00000180378 1691 ntBASIC20.33■□□□□ 0.85
Tnfsf12O54907 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Tnfsf12O54907 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Tnfsf12O54907 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Tnfsf12O54907 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Tnfsf12O54907 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Tnfsf12O54907 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Tnfsf12O54907 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Tnfsf12O54907 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC20.28■□□□□ 0.84
Tnfsf12O54907 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Tnfsf12O54907 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Tnfsf12O54907 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Tnfsf12O54907 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Tnfsf12O54907 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC20.26■□□□□ 0.83
Tnfsf12O54907 Amer2-203ENSMUST00000225247 2662 ntBASIC20.26■□□□□ 0.83
Tnfsf12O54907 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Tnfsf12O54907 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Tnfsf12O54907 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Tnfsf12O54907 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Tnfsf12O54907 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Tnfsf12O54907 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC20.22■□□□□ 0.83
Tnfsf12O54907 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Tnfsf12O54907 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Tnfsf12O54907 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC20.21■□□□□ 0.83
Tnfsf12O54907 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Tnfsf12O54907 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Tnfsf12O54907 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Tnfsf12O54907 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC20.2■□□□□ 0.82
Tnfsf12O54907 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC20.2■□□□□ 0.82
Tnfsf12O54907 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
Tnfsf12O54907 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Tnfsf12O54907 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms