Protein–RNA interactions for Protein: O35683

Ndufa1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, mousemouse

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndufa1O35683 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ndufa1O35683 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Ndufa1O35683 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ndufa1O35683 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ndufa1O35683 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ndufa1O35683 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Ndufa1O35683 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ndufa1O35683 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ndufa1O35683 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ndufa1O35683 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ndufa1O35683 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ndufa1O35683 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ndufa1O35683 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Ndufa1O35683 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ndufa1O35683 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC17.9■□□□□ 0.46
Ndufa1O35683 Gm25262-201ENSMUST00000174934 133 ntBASIC17.9■□□□□ 0.46
Ndufa1O35683 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ndufa1O35683 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ndufa1O35683 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Ndufa1O35683 AC153890.1-201ENSMUST00000220021 2469 ntBASIC17.89■□□□□ 0.45
Ndufa1O35683 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Ndufa1O35683 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ndufa1O35683 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ndufa1O35683 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ndufa1O35683 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ndufa1O35683 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC17.87■□□□□ 0.45
Ndufa1O35683 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ndufa1O35683 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ndufa1O35683 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ndufa1O35683 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ndufa1O35683 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC17.85■□□□□ 0.45
Ndufa1O35683 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ndufa1O35683 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC17.84■□□□□ 0.45
Ndufa1O35683 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Ndufa1O35683 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ndufa1O35683 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Ndufa1O35683 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Ndufa1O35683 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ndufa1O35683 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Ndufa1O35683 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ndufa1O35683 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ndufa1O35683 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Ndufa1O35683 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ndufa1O35683 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ndufa1O35683 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ndufa1O35683 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ndufa1O35683 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC17.77■□□□□ 0.44
Ndufa1O35683 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Ndufa1O35683 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Ndufa1O35683 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ndufa1O35683 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ndufa1O35683 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ndufa1O35683 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ndufa1O35683 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ndufa1O35683 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ndufa1O35683 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ndufa1O35683 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ndufa1O35683 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ndufa1O35683 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ndufa1O35683 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Ndufa1O35683 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ndufa1O35683 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ndufa1O35683 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Ndufa1O35683 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ndufa1O35683 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ndufa1O35683 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ndufa1O35683 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Ndufa1O35683 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ndufa1O35683 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Ndufa1O35683 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC17.66■□□□□ 0.42
Ndufa1O35683 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Ndufa1O35683 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ndufa1O35683 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Ndufa1O35683 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Ndufa1O35683 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC17.64■□□□□ 0.41
Ndufa1O35683 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ndufa1O35683 AL845457.1-201ENSMUST00000197244 68 ntBASIC17.63■□□□□ 0.41
Ndufa1O35683 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Ndufa1O35683 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ndufa1O35683 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ndufa1O35683 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ndufa1O35683 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ndufa1O35683 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ndufa1O35683 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Ndufa1O35683 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC17.61■□□□□ 0.41
Ndufa1O35683 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Ndufa1O35683 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ndufa1O35683 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ndufa1O35683 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Ndufa1O35683 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ndufa1O35683 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Ndufa1O35683 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC17.59■□□□□ 0.41
Ndufa1O35683 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ndufa1O35683 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Ndufa1O35683 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Ndufa1O35683 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ndufa1O35683 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC17.58■□□□□ 0.4
Ndufa1O35683 Gm6345-201ENSMUST00000180378 1691 ntBASIC17.58■□□□□ 0.4
Ndufa1O35683 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ndufa1O35683 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 14.7 ms