Protein–RNA interactions for Protein: O35627

Nr1i3, Nuclear receptor subfamily 1 group I member 3, mousemouse

Predictions only

Length 358 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1i3O35627 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC27.45■■□□□ 1.98
Nr1i3O35627 Gm26115-201ENSMUST00000175605 87 ntBASIC27.44■■□□□ 1.98
Nr1i3O35627 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC27.43■■□□□ 1.98
Nr1i3O35627 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC27.43■■□□□ 1.98
Nr1i3O35627 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC27.41■■□□□ 1.98
Nr1i3O35627 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC27.41■■□□□ 1.98
Nr1i3O35627 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC27.39■■□□□ 1.98
Nr1i3O35627 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
Nr1i3O35627 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
Nr1i3O35627 Gm8109-201ENSMUST00000194076 746 ntBASIC27.38■■□□□ 1.97
Nr1i3O35627 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC27.37■■□□□ 1.97
Nr1i3O35627 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
Nr1i3O35627 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC27.36■■□□□ 1.97
Nr1i3O35627 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
Nr1i3O35627 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
Nr1i3O35627 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
Nr1i3O35627 Gm30346-201ENSMUST00000218641 1699 ntBASIC27.34■■□□□ 1.97
Nr1i3O35627 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
Nr1i3O35627 Peli2-204ENSMUST00000226513 1320 ntBASIC27.34■■□□□ 1.97
Nr1i3O35627 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
Nr1i3O35627 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC27.33■■□□□ 1.97
Nr1i3O35627 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
Nr1i3O35627 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC27.3■■□□□ 1.96
Nr1i3O35627 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC27.3■■□□□ 1.96
Nr1i3O35627 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC27.29■■□□□ 1.96
Nr1i3O35627 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
Nr1i3O35627 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
Nr1i3O35627 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
Nr1i3O35627 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
Nr1i3O35627 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC27.24■■□□□ 1.95
Nr1i3O35627 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
Nr1i3O35627 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
Nr1i3O35627 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
Nr1i3O35627 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC27.21■■□□□ 1.95
Nr1i3O35627 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
Nr1i3O35627 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.95
Nr1i3O35627 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
Nr1i3O35627 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
Nr1i3O35627 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
Nr1i3O35627 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
Nr1i3O35627 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
Nr1i3O35627 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
Nr1i3O35627 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
Nr1i3O35627 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
Nr1i3O35627 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC27.18■■□□□ 1.94
Nr1i3O35627 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
Nr1i3O35627 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC27.17■■□□□ 1.94
Nr1i3O35627 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
Nr1i3O35627 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Nr1i3O35627 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC27.16■■□□□ 1.94
Nr1i3O35627 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC27.16■■□□□ 1.94
Nr1i3O35627 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC27.15■■□□□ 1.94
Nr1i3O35627 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
Nr1i3O35627 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC27.14■■□□□ 1.94
Nr1i3O35627 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC27.13■■□□□ 1.93
Nr1i3O35627 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC27.13■■□□□ 1.93
Nr1i3O35627 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC27.13■■□□□ 1.93
Nr1i3O35627 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
Nr1i3O35627 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
Nr1i3O35627 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
Nr1i3O35627 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
Nr1i3O35627 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC27.1■■□□□ 1.93
Nr1i3O35627 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
Nr1i3O35627 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
Nr1i3O35627 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
Nr1i3O35627 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
Nr1i3O35627 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
Nr1i3O35627 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
Nr1i3O35627 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC27.04■■□□□ 1.92
Nr1i3O35627 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC27.03■■□□□ 1.92
Nr1i3O35627 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC27.03■■□□□ 1.92
Nr1i3O35627 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC27.02■■□□□ 1.92
Nr1i3O35627 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
Nr1i3O35627 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC27.01■■□□□ 1.91
Nr1i3O35627 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC27■■□□□ 1.91
Nr1i3O35627 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC27■■□□□ 1.91
Nr1i3O35627 Amer2-203ENSMUST00000225247 2662 ntBASIC26.98■■□□□ 1.91
Nr1i3O35627 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
Nr1i3O35627 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC26.96■■□□□ 1.91
Nr1i3O35627 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC26.96■■□□□ 1.91
Nr1i3O35627 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC26.95■■□□□ 1.91
Nr1i3O35627 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
Nr1i3O35627 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
Nr1i3O35627 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
Nr1i3O35627 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
Nr1i3O35627 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC26.89■■□□□ 1.9
Nr1i3O35627 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
Nr1i3O35627 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC26.88■■□□□ 1.89
Nr1i3O35627 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
Nr1i3O35627 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
Nr1i3O35627 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
Nr1i3O35627 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
Nr1i3O35627 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
Nr1i3O35627 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
Nr1i3O35627 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
Nr1i3O35627 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
Nr1i3O35627 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC26.85■■□□□ 1.89
Nr1i3O35627 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC26.84■■□□□ 1.89
Nr1i3O35627 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC26.84■■□□□ 1.89
Nr1i3O35627 Gm24804-201ENSMUST00000174982 85 ntBASIC26.84■■□□□ 1.89
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms