Protein–RNA interactions for Protein: O35627

Nr1i3, Nuclear receptor subfamily 1 group I member 3, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1i3O35627 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC27,45■■□□□ 1,98
Nr1i3O35627 Gm26115-201ENSMUST00000175605 87 ntBASIC27,44■■□□□ 1,98
Nr1i3O35627 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC27,43■■□□□ 1,98
Nr1i3O35627 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC27,43■■□□□ 1,98
Nr1i3O35627 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC27,41■■□□□ 1,98
Nr1i3O35627 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC27,41■■□□□ 1,98
Nr1i3O35627 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC27,39■■□□□ 1,98
Nr1i3O35627 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC27,38■■□□□ 1,97
Nr1i3O35627 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC27,38■■□□□ 1,97
Nr1i3O35627 Gm8109-201ENSMUST00000194076 746 ntBASIC27,38■■□□□ 1,97
Nr1i3O35627 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC27,37■■□□□ 1,97
Nr1i3O35627 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC27,37■■□□□ 1,97
Nr1i3O35627 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC27,36■■□□□ 1,97
Nr1i3O35627 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC27,36■■□□□ 1,97
Nr1i3O35627 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC27,36■■□□□ 1,97
Nr1i3O35627 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC27,35■■□□□ 1,97
Nr1i3O35627 Gm30346-201ENSMUST00000218641 1699 ntBASIC27,34■■□□□ 1,97
Nr1i3O35627 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC27,34■■□□□ 1,97
Nr1i3O35627 Peli2-204ENSMUST00000226513 1320 ntBASIC27,34■■□□□ 1,97
Nr1i3O35627 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC27,33■■□□□ 1,97
Nr1i3O35627 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC27,33■■□□□ 1,97
Nr1i3O35627 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC27,32■■□□□ 1,96
Nr1i3O35627 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC27,3■■□□□ 1,96
Nr1i3O35627 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC27,3■■□□□ 1,96
Nr1i3O35627 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC27,29■■□□□ 1,96
Nr1i3O35627 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC27,28■■□□□ 1,96
Nr1i3O35627 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC27,28■■□□□ 1,96
Nr1i3O35627 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC27,25■■□□□ 1,95
Nr1i3O35627 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC27,24■■□□□ 1,95
Nr1i3O35627 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC27,24■■□□□ 1,95
Nr1i3O35627 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC27,23■■□□□ 1,95
Nr1i3O35627 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC27,22■■□□□ 1,95
Nr1i3O35627 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC27,22■■□□□ 1,95
Nr1i3O35627 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC27,21■■□□□ 1,95
Nr1i3O35627 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC27,21■■□□□ 1,95
Nr1i3O35627 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC27,2■■□□□ 1,95
Nr1i3O35627 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC27,2■■□□□ 1,94
Nr1i3O35627 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC27,2■■□□□ 1,94
Nr1i3O35627 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC27,19■■□□□ 1,94
Nr1i3O35627 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC27,19■■□□□ 1,94
Nr1i3O35627 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC27,19■■□□□ 1,94
Nr1i3O35627 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC27,18■■□□□ 1,94
Nr1i3O35627 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC27,18■■□□□ 1,94
Nr1i3O35627 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC27,18■■□□□ 1,94
Nr1i3O35627 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC27,18■■□□□ 1,94
Nr1i3O35627 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC27,18■■□□□ 1,94
Nr1i3O35627 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC27,17■■□□□ 1,94
Nr1i3O35627 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC27,17■■□□□ 1,94
Nr1i3O35627 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC27,17■■□□□ 1,94
Nr1i3O35627 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC27,16■■□□□ 1,94
Nr1i3O35627 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC27,16■■□□□ 1,94
Nr1i3O35627 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC27,15■■□□□ 1,94
Nr1i3O35627 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC27,15■■□□□ 1,94
Nr1i3O35627 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC27,14■■□□□ 1,94
Nr1i3O35627 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC27,13■■□□□ 1,93
Nr1i3O35627 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC27,13■■□□□ 1,93
Nr1i3O35627 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC27,13■■□□□ 1,93
Nr1i3O35627 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC27,12■■□□□ 1,93
Nr1i3O35627 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC27,12■■□□□ 1,93
Nr1i3O35627 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC27,12■■□□□ 1,93
Nr1i3O35627 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC27,11■■□□□ 1,93
Nr1i3O35627 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC27,1■■□□□ 1,93
Nr1i3O35627 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC27,1■■□□□ 1,93
Nr1i3O35627 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC27,07■■□□□ 1,92
Nr1i3O35627 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC27,06■■□□□ 1,92
Nr1i3O35627 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC27,05■■□□□ 1,92
Nr1i3O35627 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC27,04■■□□□ 1,92
Nr1i3O35627 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC27,04■■□□□ 1,92
Nr1i3O35627 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC27,04■■□□□ 1,92
Nr1i3O35627 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC27,03■■□□□ 1,92
Nr1i3O35627 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC27,03■■□□□ 1,92
Nr1i3O35627 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC27,02■■□□□ 1,92
Nr1i3O35627 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC27,02■■□□□ 1,92
Nr1i3O35627 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC27,01■■□□□ 1,91
Nr1i3O35627 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC27■■□□□ 1,91
Nr1i3O35627 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC27■■□□□ 1,91
Nr1i3O35627 Amer2-203ENSMUST00000225247 2662 ntBASIC26,98■■□□□ 1,91
Nr1i3O35627 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC26,97■■□□□ 1,91
Nr1i3O35627 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC26,96■■□□□ 1,91
Nr1i3O35627 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC26,96■■□□□ 1,91
Nr1i3O35627 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC26,95■■□□□ 1,91
Nr1i3O35627 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC26,95■■□□□ 1,9
Nr1i3O35627 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC26,93■■□□□ 1,9
Nr1i3O35627 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC26,93■■□□□ 1,9
Nr1i3O35627 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC26,9■■□□□ 1,9
Nr1i3O35627 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC26,89■■□□□ 1,9
Nr1i3O35627 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC26,89■■□□□ 1,89
Nr1i3O35627 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC26,88■■□□□ 1,89
Nr1i3O35627 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC26,88■■□□□ 1,89
Nr1i3O35627 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC26,88■■□□□ 1,89
Nr1i3O35627 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC26,88■■□□□ 1,89
Nr1i3O35627 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC26,86■■□□□ 1,89
Nr1i3O35627 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC26,86■■□□□ 1,89
Nr1i3O35627 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC26,86■■□□□ 1,89
Nr1i3O35627 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC26,86■■□□□ 1,89
Nr1i3O35627 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC26,85■■□□□ 1,89
Nr1i3O35627 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC26,85■■□□□ 1,89
Nr1i3O35627 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC26,84■■□□□ 1,89
Nr1i3O35627 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC26,84■■□□□ 1,89
Nr1i3O35627 Gm24804-201ENSMUST00000174982 85 ntBASIC26,84■■□□□ 1,89
Retrieved 100 of 76,532 protein–RNA pairs in 16,1 ms