Protein–RNA interactions for Protein: O35445

Rnf5, E3 ubiquitin-protein ligase RNF5, mousemouse

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf5O35445 Gm6345-201ENSMUST00000180378 1691 ntBASIC20.22■□□□□ 0.83
Rnf5O35445 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC20.21■□□□□ 0.83
Rnf5O35445 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC20.21■□□□□ 0.83
Rnf5O35445 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Rnf5O35445 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rnf5O35445 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rnf5O35445 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Rnf5O35445 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Rnf5O35445 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rnf5O35445 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Rnf5O35445 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rnf5O35445 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Rnf5O35445 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rnf5O35445 Zxda-201ENSMUST00000117281 2621 ntBASIC20.17■□□□□ 0.82
Rnf5O35445 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Rnf5O35445 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rnf5O35445 Gm9905-201ENSMUST00000065740 1845 ntBASIC20.16■□□□□ 0.82
Rnf5O35445 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rnf5O35445 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rnf5O35445 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Rnf5O35445 Gm24804-201ENSMUST00000174982 85 ntBASIC20.14■□□□□ 0.81
Rnf5O35445 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rnf5O35445 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rnf5O35445 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Rnf5O35445 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Rnf5O35445 Gm30346-201ENSMUST00000218641 1699 ntBASIC20.13■□□□□ 0.81
Rnf5O35445 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Rnf5O35445 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rnf5O35445 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Rnf5O35445 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Rnf5O35445 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Rnf5O35445 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Rnf5O35445 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Rnf5O35445 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rnf5O35445 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rnf5O35445 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rnf5O35445 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Rnf5O35445 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Rnf5O35445 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rnf5O35445 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rnf5O35445 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rnf5O35445 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rnf5O35445 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Rnf5O35445 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Rnf5O35445 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC20.02■□□□□ 0.8
Rnf5O35445 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rnf5O35445 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Rnf5O35445 Gm43445-201ENSMUST00000198564 2091 ntBASIC20.01■□□□□ 0.79
Rnf5O35445 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Rnf5O35445 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC20■□□□□ 0.79
Rnf5O35445 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rnf5O35445 Gm6206-201ENSMUST00000133472 2199 ntBASIC20■□□□□ 0.79
Rnf5O35445 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rnf5O35445 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Rnf5O35445 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rnf5O35445 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Rnf5O35445 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rnf5O35445 Gm16148-201ENSMUST00000119653 893 ntBASIC19.98■□□□□ 0.79
Rnf5O35445 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Rnf5O35445 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rnf5O35445 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Rnf5O35445 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rnf5O35445 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rnf5O35445 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Rnf5O35445 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Rnf5O35445 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rnf5O35445 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Rnf5O35445 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Rnf5O35445 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Rnf5O35445 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Rnf5O35445 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Rnf5O35445 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC19.89■□□□□ 0.77
Rnf5O35445 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC19.88■□□□□ 0.77
Rnf5O35445 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Rnf5O35445 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Rnf5O35445 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rnf5O35445 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rnf5O35445 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC19.86■□□□□ 0.77
Rnf5O35445 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC19.85■□□□□ 0.77
Rnf5O35445 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rnf5O35445 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Rnf5O35445 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Rnf5O35445 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rnf5O35445 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Rnf5O35445 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rnf5O35445 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rnf5O35445 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rnf5O35445 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Rnf5O35445 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Rnf5O35445 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC19.78■□□□□ 0.76
Rnf5O35445 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Rnf5O35445 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC19.77■□□□□ 0.76
Rnf5O35445 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Rnf5O35445 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Rnf5O35445 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rnf5O35445 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC19.77■□□□□ 0.76
Rnf5O35445 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Rnf5O35445 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Rnf5O35445 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC19.76■□□□□ 0.75
Rnf5O35445 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 12.8 ms